Create a Feature Map for a given protein structure
FeatureMap(1) Manual Page
Name
FeatureMap - Create a Feature Map for a given protein structure
Synopsis
FeatureMap [-hV] [--iA] [--iAng] [--iP] [--iS] [--mI] [-d=,] file…
Description
Options
- -d, --delimiter=,
-
Delimiter of input variant list file
- -h, --help
-
Print command help and exit.
- --iA, --includeAcidity
-
Include acidity change in feature map.
- --iAng, --includeAngles
-
Include ramachandran angles in feature map.
- --iP, --includePolarity
-
Include polarity change in feature map.
- --iS, --includeStructure
-
Include secondary structure annotations in feature map.
- --mI, --multiple isomers
-
Set this flag if the variant list contains variants from multiple isomers. Isomer should be in name of pdb file
- -V, --version
-
Print the Force Field X version and exit.
Arguments
- file…
-
The atomic coordinate file in PDB or XYZ format, variant list file, and a free energy file