Calculate the mean system density for single topology systems.
Density(1) Manual Page
Name
Density - Calculate the mean system density for single topology systems.
Synopsis
Density [-hpV] [-f=all frames] [-F=XYZ] [-s=1] [--st=1] file
Description
Options
- -f, --final=all frames
-
Last frame to evaluate (1-indexed); values less than 1 evaluate to end of trajectory.
- -F, --fileFormat=XYZ
-
Choose file type to write [PDB/XYZ].
- -h, --help
-
Print command help and exit.
- -p, --printout
-
Print out a file with density adjusted to match mean calculated density.
- -s, --start=1
-
First frame to evaluate (1-indexed).
- --st, --stride=1
-
Stride: evaluate density every N frames. Must be positive.
- -V, --version
-
Print the Force Field X version and exit.
Arguments
- file
-
An atomic coordinate file in PDB or XYZ format.