Real Space Refinement Commands
Optimize an atomic resolution structure against real space data (i.e. a map from X-ray Diffraction or CryoEM).
| Command | Purpose |
|---|---|
| realspace.Anneal | The realspace.Anneal command applies simulated annealing using a real space objective function. |
| realspace.Dynamics | The realspace.Dynamics command runs a dynamics simulation using a real space objective function. |
| realspace.ManyBody | The realspace.ManyBody command globally optimizes the side-chains of a protein using a real space objective function. |
| realspace.Minimize | The realspace.Minimize command minimizes the system using a real space objective function. |