Surefire Report
Summary
[Summary] [Package List] [Test Cases]
| Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|
| 857 | 0 | 0 | 0 | 100% | 448.6 s |
Note: failures are anticipated and checked for with assertions while errors are unanticipated.
Package List
[Summary] [Package List] [Test Cases]
| Package | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|
| ffx.algorithms.commands | 85 | 0 | 0 | 0 | 100% | 123.5 s |
| ffx.potential.nonbonded | 1 | 0 | 0 | 0 | 100% | 0.017 s |
| ffx.potential.utils | 3 | 0 | 0 | 0 | 100% | 0.150 s |
| ffx.xray.parsers | 6 | 0 | 0 | 0 | 100% | 3.584 s |
| ffx.numerics.estimator | 1 | 0 | 0 | 0 | 100% | 6.072 s |
| ffx.numerics.spline | 14 | 0 | 0 | 0 | 100% | 0.312 s |
| ffx.numerics.integrate | 7 | 0 | 0 | 0 | 100% | 0.234 s |
| ffx.potential.commands | 175 | 0 | 0 | 0 | 100% | 138.2 s |
| ffx.numerics.func1d | 2 | 0 | 0 | 0 | 100% | 0.060 s |
| ffx.numerics.multipole | 68 | 0 | 0 | 0 | 100% | 1.345 s |
| ffx.numerics.quickhull | 2 | 0 | 0 | 0 | 100% | 1.127 s |
| ffx.numerics.special | 193 | 0 | 0 | 0 | 100% | 4.679 s |
| ffx.xray | 26 | 0 | 0 | 0 | 100% | 139.3 s |
| ffx.realspace | 1 | 0 | 0 | 0 | 100% | 0.432 s |
| ffx.potential.parsers | 1 | 0 | 0 | 0 | 100% | 0.600 s |
| ffx.numerics.math | 10 | 0 | 0 | 0 | 100% | 0.267 s |
| ffx.openmm | 2 | 0 | 0 | 0 | 100% | 0.227 s |
| ffx.numerics.fft | 193 | 0 | 0 | 0 | 100% | 5.622 s |
| ffx.crystal | 13 | 0 | 0 | 0 | 100% | 0.593 s |
| ffx.utilities | 2 | 0 | 0 | 0 | 100% | 0.038 s |
| ffx.algorithms.optimize | 18 | 0 | 0 | 0 | 100% | 19.29 s |
| ffx.numerics.clustering | 12 | 0 | 0 | 0 | 100% | 2.104 s |
| ffx.potential.bonded | 22 | 0 | 0 | 0 | 100% | 0.871 s |
Note: package statistics are not computed recursively, they only sum up all of its testsuites numbers.
ffx.algorithms.commands
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| AnnealTest | 1 | 0 | 0 | 0 | 100% | 5.731 s | |
| ManyBodyTest | 7 | 0 | 0 | 0 | 100% | 85.24 s | |
| DynamicsNVETest | 2 | 0 | 0 | 0 | 100% | 0.671 s | |
| BARDualTopologyTest | 1 | 0 | 0 | 0 | 100% | 0.055 s | |
| MBARFilesTest | 1 | 0 | 0 | 0 | 100% | 0.027 s | |
| DynamicsStochasticTest | 9 | 0 | 0 | 0 | 100% | 1.445 s | |
| ThermodynamicsTest | 21 | 0 | 0 | 0 | 100% | 1.100 s | |
| MinimizeTest | 3 | 0 | 0 | 0 | 100% | 1.497 s | |
| BARSingleTopologyTest | 1 | 0 | 0 | 0 | 100% | 0.048 s | |
| MinimizeCrystalsTest | 5 | 0 | 0 | 0 | 100% | 2.711 s | |
| BARFilesTest | 1 | 0 | 0 | 0 | 100% | 0.045 s | |
| GenZTest | 2 | 0 | 0 | 0 | 100% | 0.078 s | |
| DynamicsRESPANVETest | 1 | 0 | 0 | 0 | 100% | 2.057 s | |
| DynamicsOpenMMRESPANVETest | 1 | 0 | 0 | 0 | 100% | 0.033 s | |
| SuperposeCrystalsTest | 20 | 0 | 0 | 0 | 100% | 3.063 s | |
| DynamicsBeemanBerendsenTest | 1 | 0 | 0 | 0 | 100% | 0.541 s | |
| ClusterTest | 2 | 0 | 0 | 0 | 100% | 0.143 s | |
| DynamicsInitVelocitiesTest | 1 | 0 | 0 | 0 | 100% | 0.880 s | |
| OSTGradientTest | 3 | 0 | 0 | 0 | 100% | 2.572 s | |
| DynamicsNVTTest | 1 | 0 | 0 | 0 | 100% | 15.54 s | |
| DynamicsOpenMMStochasticTest | 1 | 0 | 0 | 0 | 100% | 0.036 s |
ffx.potential.nonbonded
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| NeckIntegralTest | 1 | 0 | 0 | 0 | 100% | 0.017 s |
ffx.potential.utils
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| SwitchFunctionTest | 3 | 0 | 0 | 0 | 100% | 0.150 s |
ffx.xray.parsers
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| CIFFilterTest | 2 | 0 | 0 | 0 | 100% | 1.335 s | |
| MTZFilterTest | 4 | 0 | 0 | 0 | 100% | 2.249 s |
ffx.numerics.estimator
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| MBARHarmonicOscillatorsTest | 1 | 0 | 0 | 0 | 100% | 6.072 s |
ffx.numerics.spline
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| UniformBSplineTest | 14 | 0 | 0 | 0 | 100% | 0.312 s |
ffx.numerics.integrate
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| Integrate1DTest | 6 | 0 | 0 | 0 | 100% | 0.200 s | |
| IntegrationTest | 1 | 0 | 0 | 0 | 100% | 0.034 s |
ffx.potential.commands
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| Cart2FracTest | 2 | 0 | 0 | 0 | 100% | 0.143 s | |
| MoveIntoUnitCellTest | 2 | 0 | 0 | 0 | 100% | 0.165 s | |
| GKEnergyTest | 32 | 0 | 0 | 0 | 100% | 7.713 s | |
| LambdaGradientTest | 4 | 0 | 0 | 0 | 100% | 40.78 s | |
| TimerTest | 2 | 0 | 0 | 0 | 100% | 8.038 s | |
| ExportQETest | 2 | 0 | 0 | 0 | 100% | 0.125 s | |
| OPLSAAEnergyTest | 21 | 0 | 0 | 0 | 100% | 9.561 s | |
| FFtoXMLTest | 2 | 0 | 0 | 0 | 100% | 0.302 s | |
| SaveAsP1Test | 2 | 0 | 0 | 0 | 100% | 2.501 s | |
| VolumeTest | 19 | 0 | 0 | 0 | 100% | 13.73 s | |
| EnergyTest | 60 | 0 | 0 | 0 | 100% | 24.05 s | |
| SolvatorTest | 4 | 0 | 0 | 0 | 100% | 1.157 s | |
| BiotypeTest | 2 | 0 | 0 | 0 | 100% | 0.121 s | |
| PhGradientTest | 2 | 0 | 0 | 0 | 100% | 3.369 s | |
| PrepareSpaceGroupsTest | 4 | 0 | 0 | 0 | 100% | 24.97 s | |
| SaveAsXYZTest | 2 | 0 | 0 | 0 | 100% | 0.338 s | |
| Frac2CartTest | 2 | 0 | 0 | 0 | 100% | 0.200 s | |
| SaveAsPDBTest | 2 | 0 | 0 | 0 | 100% | 0.227 s | |
| ImportCIFTest | 9 | 0 | 0 | 0 | 100% | 0.674 s |
ffx.numerics.func1d
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| QuasiLinearSwitchTest | 2 | 0 | 0 | 0 | 100% | 0.060 s |
ffx.numerics.multipole
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| GKTensorQITest | 12 | 0 | 0 | 0 | 100% | 0.232 s | |
| MultipoleTensorQITest | 15 | 0 | 0 | 0 | 100% | 0.331 s | |
| MultipoleTensorTest | 6 | 0 | 0 | 0 | 100% | 0.122 s | |
| MultipoleTensorQISIMDTest | 2 | 0 | 0 | 0 | 100% | 0.020 s | |
| MultipoleTensorGlobalSIMDTest | 2 | 0 | 0 | 0 | 100% | 0.042 s | |
| CombinedTensorTest | 2 | 0 | 0 | 0 | 100% | 0.006 s | |
| GKTensorGlobalTest | 12 | 0 | 0 | 0 | 100% | 0.257 s | |
| AMOEBAPlusMultipoleTensorGlobalTest | 2 | 0 | 0 | 0 | 100% | 0.007 s | |
| MultipoleTensorGlobalTest | 15 | 0 | 0 | 0 | 100% | 0.328 s |
ffx.numerics.quickhull
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| ConvexHullTest | 1 | 0 | 0 | 0 | 100% | 0.024 s | |
| QuickHull3DTest | 1 | 0 | 0 | 0 | 100% | 1.103 s |
ffx.numerics.special
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| ErfTest | 68 | 0 | 0 | 0 | 100% | 1.678 s | |
| ModifiedBesselTest | 125 | 0 | 0 | 0 | 100% | 3.001 s |
ffx.xray
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| CrystalReciprocalSpaceTest | 2 | 0 | 0 | 0 | 100% | 4.069 s | |
| FormFactorTest | 4 | 0 | 0 | 0 | 100% | 0.131 s | |
| XRayMinimizeTest | 14 | 0 | 0 | 0 | 100% | 63.56 s | |
| XRayGradientTest | 4 | 0 | 0 | 0 | 100% | 50.81 s | |
| XRayManyBodyTest | 2 | 0 | 0 | 0 | 100% | 20.73 s |
ffx.realspace
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| RealspaceManyBodyTest | 1 | 0 | 0 | 0 | 100% | 0.432 s |
ffx.potential.parsers
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| ForceFieldFilterTest | 1 | 0 | 0 | 0 | 100% | 0.600 s |
ffx.numerics.math
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| SquareRootTest | 10 | 0 | 0 | 0 | 100% | 0.267 s |
ffx.openmm
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| OpenMMHarmonicBondTest | 2 | 0 | 0 | 0 | 100% | 0.227 s |
ffx.numerics.fft
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| Real3DTest | 4 | 0 | 0 | 0 | 100% | 0.170 s | |
| Complex3DParallelTest | 8 | 0 | 0 | 0 | 100% | 0.554 s | |
| Complex3DTest | 4 | 0 | 0 | 0 | 100% | 0.199 s | |
| Real3DParallelTest | 8 | 0 | 0 | 0 | 100% | 0.299 s | |
| ComplexTest | 72 | 0 | 0 | 0 | 100% | 1.987 s | |
| Complex2DTest | 16 | 0 | 0 | 0 | 100% | 0.391 s | |
| Complex1DTest | 78 | 0 | 0 | 0 | 100% | 1.943 s | |
| RealTest | 3 | 0 | 0 | 0 | 100% | 0.079 s |
ffx.crystal
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| ReflectionListTest | 6 | 0 | 0 | 0 | 100% | 0.467 s | |
| CrystalVolumeDerivativeTest | 7 | 0 | 0 | 0 | 100% | 0.126 s |
ffx.utilities
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| Hybrid36Test | 2 | 0 | 0 | 0 | 100% | 0.038 s |
ffx.algorithms.optimize
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| PhRepexTest | 2 | 0 | 0 | 0 | 100% | 3.306 s | |
| RotamerOptimizationTest | 16 | 0 | 0 | 0 | 100% | 15.98 s |
ffx.numerics.clustering
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| DistanceMapTest | 4 | 0 | 0 | 0 | 100% | 0.085 s | |
| ClusterTest | 2 | 0 | 0 | 0 | 100% | 0.037 s | |
| ClusterPerfTest | 3 | 0 | 0 | 0 | 100% | 1.884 s | |
| DefaultClusteringAlgorithmTest | 2 | 0 | 0 | 0 | 100% | 0.076 s | |
| WeightedClusteringAlgorithmTest | 1 | 0 | 0 | 0 | 100% | 0.022 s |
ffx.potential.bonded
| - | Class | Tests | Errors | Failures | Skipped | Success Rate | Time |
|---|---|---|---|---|---|---|---|
| AngleTest | 2 | 0 | 0 | 0 | 100% | 0.002 s | |
| MSNodeTest | 3 | 0 | 0 | 0 | 100% | 0.002 s | |
| TorsionTest | 1 | 0 | 0 | 0 | 100% | 0.005 s | |
| LoopClosureTest | 1 | 0 | 0 | 0 | 100% | 0.848 s | |
| BondTest | 6 | 0 | 0 | 0 | 100% | 0.007 s | |
| AtomTest | 9 | 0 | 0 | 0 | 100% | 0.007 s |
Test Cases
[Summary] [Package List] [Test Cases]
Hybrid36Test
| testDecode | 0.011 s | |
| testEncode | 0.018 s |
ErfTest
Real3DTest
| testConvolution[0] | 0.048 s | |
| testFft[0] | 0.036 s | |
| testConvolution[1] | 0.048 s | |
| testFft[1] | 0.037 s |
Complex3DParallelTest
| testConvolution[0] | 0.066 s | |
| testFft[0] | 0.054 s | |
| testConvolution[1] | 0.043 s | |
| testFft[1] | 0.047 s | |
| testConvolution[2] | 0.072 s | |
| testFft[2] | 0.065 s | |
| testConvolution[3] | 0.102 s | |
| testFft[3] | 0.095 s |
Complex3DTest
| testConvolution[0] | 0.035 s | |
| testFft[0] | 0.031 s | |
| testConvolution[1] | 0.066 s | |
| testFft[1] | 0.064 s |
MBARHarmonicOscillatorsTest
| testMBAROscillators | 6.072 s |
Real3DParallelTest
| testConvolution[0] | 0.042 s | |
| testFft[0] | 0.036 s | |
| testConvolution[1] | 0.036 s | |
| testFft[1] | 0.038 s | |
| testConvolution[2] | 0.033 s | |
| testFft[2] | 0.035 s | |
| testConvolution[3] | 0.035 s | |
| testFft[3] | 0.036 s |
QuasiLinearSwitchTest
| testPoints[0] | 0.035 s | |
| testPoints[1] | 0.021 s |
GKTensorQITest
| polarizationEnergyDirectTest | 0.019 s | |
| quadrupoleTensorTest | 0.019 s | |
| permanentEnergyAndGradientTest | 0.020 s | |
| chargeFiniteDifferenceTest | 0.020 s | |
| dipoleFiniteDifferenceTest | 0.018 s | |
| dipoleTensorTest | 0.018 s | |
| chargeTensorTest | 0.015 s | |
| polarizationEnergyAndGradientDirectTest | 0.018 s | |
| permanentEnergyTest | 0.019 s | |
| tensorAuxiliaryTest | 0.017 s | |
| polarizationEnergyTest | 0.019 s | |
| polarizationEnergyAndGradientTest | 0.019 s |
DistanceMapTest
| testMapRemovalByObjectPollLoop | 0.018 s | |
| testMapWorksWithSameDistance | 0.020 s | |
| testMapRemovalFront | 0.022 s | |
| testMapRemovalByObjectPollLoopHandlesAllEmpty | 0.019 s |
SquareRootTest
| testInverseSqrt[0] | 0.027 s | |
| testSqrt[0] | 0.026 s | |
| testInverseSqrt[1] | 0.026 s | |
| testSqrt[1] | 0.028 s | |
| testInverseSqrt[2] | 0.023 s | |
| testSqrt[2] | 0.025 s | |
| testInverseSqrt[3] | 0.024 s | |
| testSqrt[3] | 0.027 s | |
| testInverseSqrt[4] | 0.025 s | |
| testSqrt[4] | 0.025 s |
ClusterTest
| testGetTotalDistance | 0.018 s | |
| testCountLeafs | 0.016 s |
MultipoleTensorQITest
| multipoleTensorTest[0] | 0.027 s | |
| codeGenerationTest[0] | 0.032 s | |
| finiteDifferenceTest[0] | 0.019 s | |
| polarizationEnergyAndGradTest[0] | 0.015 s | |
| permanentMultipoleEnergyAndGradTest[0] | 0.018 s | |
| multipoleTensorTest[1] | 0.019 s | |
| codeGenerationTest[1] | 0.019 s | |
| finiteDifferenceTest[1] | 0.020 s | |
| polarizationEnergyAndGradTest[1] | 0.020 s | |
| permanentMultipoleEnergyAndGradTest[1] | 0.019 s | |
| multipoleTensorTest[2] | 0.020 s | |
| codeGenerationTest[2] | 0.020 s | |
| finiteDifferenceTest[2] | 0.020 s | |
| polarizationEnergyAndGradTest[2] | 0.020 s | |
| permanentMultipoleEnergyAndGradTest[2] | 0.022 s |
ClusterPerfTest
| testRandomDataDist | 0.018 s | |
| testRandomDataNames | 0.019 s | |
| testn | 1.844 s |
MultipoleTensorTest
| tensorCountTest[0] | 0.019 s | |
| tensorIndexTest[0] | 0.019 s | |
| tensorCountTest[1] | 0.018 s | |
| tensorIndexTest[1] | 0.019 s | |
| tensorCountTest[2] | 0.020 s | |
| tensorIndexTest[2] | 0.018 s |
ComplexTest
MultipoleTensorQISIMDTest
| polarizationEnergyAndGradientTest[0] | 0.016 s | |
| permanentMultipoleEnergyAndGradTest[0] | 0.003 s |
MultipoleTensorGlobalSIMDTest
| polarizationEnergyAndGradientTest[0] | 0.038 s | |
| permanentMultipoleEnergyAndGradTest[0] | 0.003 s |
DefaultClusteringAlgorithmTest
| testDuplicateNames | 0.043 s | |
| testClusteringAvgLink | 0.020 s |
CombinedTensorTest
| polarizationEnergyAndGradientTest[0] | 0.002 s | |
| permanentMultipoleEnergyAndGradTest[0] | 0.002 s |
Complex2DTest
| testInterleavedScalar[0] | 0.024 s | |
| testBlockedScalarPacked[0] | 0.021 s | |
| testBlockedSIMDPacked[0] | 0.020 s | |
| testInterleavedSIMDPacked[0] | 0.024 s | |
| testBlockedSIMD[0] | 0.021 s | |
| testBlockedScalar[0] | 0.023 s | |
| testInterleavedSIMD[0] | 0.022 s | |
| testInterleavedScalarPacked[0] | 0.023 s | |
| testInterleavedScalar[1] | 0.024 s | |
| testBlockedScalarPacked[1] | 0.024 s | |
| testBlockedSIMDPacked[1] | 0.024 s | |
| testInterleavedSIMDPacked[1] | 0.028 s | |
| testBlockedSIMD[1] | 0.025 s | |
| testBlockedScalar[1] | 0.024 s | |
| testInterleavedSIMD[1] | 0.028 s | |
| testInterleavedScalarPacked[1] | 0.020 s |
Complex1DTest
GKTensorGlobalTest
| polarizationEnergyDirectTest | 0.025 s | |
| quadrupoleTensorTest | 0.020 s | |
| permanentEnergyAndGradientTest | 0.020 s | |
| chargeFiniteDifferenceTest | 0.021 s | |
| dipoleFiniteDifferenceTest | 0.021 s | |
| dipoleTensorTest | 0.020 s | |
| chargeTensorTest | 0.016 s | |
| polarizationEnergyAndGradientDirectTest | 0.018 s | |
| permanentEnergyTest | 0.021 s | |
| tensorAuxiliaryTest | 0.020 s | |
| polarizationEnergyTest | 0.020 s | |
| polarizationEnergyAndGradientTest | 0.021 s |
Integrate1DTest
| castToDoubleSetTest | 0.041 s | |
| testSinCosine | 0.052 s | |
| parallelTest | 0.025 s | |
| polynomialTest | 0.019 s | |
| testByBinIntegral | 0.031 s | |
| polynomialGrinderTest | 0.026 s |
ModifiedBesselTest
AMOEBAPlusMultipoleTensorGlobalTest
| inducedDipoleEnergyAndGradient[0] | 0.002 s | |
| permanentMultipoleEnergyAndGradTest[0] | 0.003 s |
ConvexHullTest
| testConvexHull | 0.024 s |
MultipoleTensorGlobalTest
| multipoleTensorTest[0] | 0.034 s | |
| finiteDifferenceTest[0] | 0.021 s | |
| codingGenerationTest[0] | 0.035 s | |
| polarizationEnergyAndGradTest[0] | 0.016 s | |
| permanentMultipoleEnergyAndGradTest[0] | 0.015 s | |
| multipoleTensorTest[1] | 0.024 s | |
| finiteDifferenceTest[1] | 0.013 s | |
| codingGenerationTest[1] | 0.014 s | |
| polarizationEnergyAndGradTest[1] | 0.017 s | |
| permanentMultipoleEnergyAndGradTest[1] | 0.018 s | |
| multipoleTensorTest[2] | 0.018 s | |
| finiteDifferenceTest[2] | 0.022 s | |
| codingGenerationTest[2] | 0.021 s | |
| polarizationEnergyAndGradTest[2] | 0.020 s | |
| permanentMultipoleEnergyAndGradTest[2] | 0.023 s |
QuickHull3DTest
| doTest | 1.101 s |
IntegrationTest
| integrationTest | 0.032 s |
WeightedClusteringAlgorithmTest
| testClusteringAvgLink | 0.020 s |
UniformBSplineTest
| testBSpline[0] | 0.025 s | |
| testBSplineDerivatives[0] | 0.016 s | |
| testBSpline[1] | 0.017 s | |
| testBSplineDerivatives[1] | 0.021 s | |
| testBSpline[2] | 0.021 s | |
| testBSplineDerivatives[2] | 0.023 s | |
| testBSpline[3] | 0.023 s | |
| testBSplineDerivatives[3] | 0.021 s | |
| testBSpline[4] | 0.020 s | |
| testBSplineDerivatives[4] | 0.021 s | |
| testBSpline[5] | 0.021 s | |
| testBSplineDerivatives[5] | 0.021 s | |
| testBSpline[6] | 0.021 s | |
| testBSplineDerivatives[6] | 0.021 s |
RealTest
| testFft[0] | 0.029 s | |
| testFft[1] | 0.023 s | |
| testFft[2] | 0.023 s |
ReflectionListTest
| testreflections[0] | 0.257 s | |
| testsize[0] | 0.129 s | |
| testreflections[1] | 0.014 s | |
| testsize[1] | 0.015 s | |
| testreflections[2] | 0.015 s | |
| testsize[2] | 0.017 s |
CrystalVolumeDerivativeTest
| finiteDifferenceTest[0] | 0.020 s | |
| finiteDifferenceTest[1] | 0.014 s | |
| finiteDifferenceTest[2] | 0.015 s | |
| finiteDifferenceTest[3] | 0.016 s | |
| finiteDifferenceTest[4] | 0.018 s | |
| finiteDifferenceTest[5] | 0.016 s | |
| finiteDifferenceTest[6] | 0.015 s |
OpenMMHarmonicBondTest
| testHarmonicBondEnergyAtEquilibriumOpenCL | 0.016 s | |
| testHarmonicBondEnergyDisplacedOpenCL | 0.004 s |
Cart2FracTest
| testCart2FractHelp | 0.030 s | |
| testCart2Frac | 0.111 s |
AngleTest
| Angle_getCommonBond | 0.001 s | |
| Angle_getOtherBond | 0.001 s |
MoveIntoUnitCellTest
| testMoveIntoUnitCell | 0.133 s | |
| testMoveIntoUnitCellHelp | 0.030 s |
ForceFieldFilterTest
| testParse | 0.589 s |
GKEnergyTest
| testGradient[0] | 0.038 s | |
| testLambdaGradient[0] | 0.035 s | |
| testEnergy[0] | 1.131 s | |
| testOpenMMEnergy[0] | 0.023 s | |
| testGradient[1] | 0.030 s | |
| testLambdaGradient[1] | 0.035 s | |
| testEnergy[1] | 0.647 s | |
| testOpenMMEnergy[1] | 0.024 s | |
| testGradient[2] | 0.031 s | |
| testLambdaGradient[2] | 0.032 s | |
| testEnergy[2] | 1.046 s | |
| testOpenMMEnergy[2] | 0.028 s | |
| testGradient[3] | 0.033 s | |
| testLambdaGradient[3] | 0.042 s | |
| testEnergy[3] | 0.856 s | |
| testOpenMMEnergy[3] | 0.028 s | |
| testGradient[4] | 0.031 s | |
| testLambdaGradient[4] | 0.036 s | |
| testEnergy[4] | 0.796 s | |
| testOpenMMEnergy[4] | 0.031 s | |
| testGradient[5] | 0.031 s | |
| testLambdaGradient[5] | 0.036 s | |
| testEnergy[5] | 0.847 s | |
| testOpenMMEnergy[5] | 0.030 s | |
| testGradient[6] | 0.039 s | |
| testLambdaGradient[6] | 0.041 s | |
| testEnergy[6] | 0.829 s | |
| testOpenMMEnergy[6] | 0.026 s | |
| testGradient[7] | 0.028 s | |
| testLambdaGradient[7] | 0.039 s | |
| testEnergy[7] | 0.746 s | |
| testOpenMMEnergy[7] | 0.032 s |
LambdaGradientTest
| testLambdaGradientSymOp | 22.72 s | |
| testLambdaGradient | 4.867 s | |
| testLambdaGradientHelp | 0.049 s | |
| testLambdaGradientIntermolecularSoftcore | 13.15 s |
TimerTest
| testTimer | 8.007 s | |
| testTimerHelp | 0.029 s |
ExportQETest
| testXYZtoQEHelp | 0.046 s | |
| testXYZtoQE | 0.077 s |
OPLSAAEnergyTest
| testGradient[0] | 0.741 s | |
| testLambdaGradient[0] | 1.112 s | |
| testEnergy[0] | 0.173 s | |
| testGradient[1] | 0.680 s | |
| testLambdaGradient[1] | 1.015 s | |
| testEnergy[1] | 0.217 s | |
| testGradient[2] | 0.396 s | |
| testLambdaGradient[2] | 0.970 s | |
| testEnergy[2] | 0.144 s | |
| testGradient[3] | 0.483 s | |
| testLambdaGradient[3] | 0.772 s | |
| testEnergy[3] | 0.180 s | |
| testGradient[4] | 0.299 s | |
| testLambdaGradient[4] | 0.443 s | |
| testEnergy[4] | 0.133 s | |
| testGradient[5] | 0.255 s | |
| testLambdaGradient[5] | 0.612 s | |
| testEnergy[5] | 0.201 s | |
| testGradient[6] | 0.168 s | |
| testLambdaGradient[6] | 0.423 s | |
| testEnergy[6] | 0.128 s |
FFtoXMLTest
| testFFtoXMLHelp | 0.219 s | |
| testFFtoXML | 0.080 s |
SaveAsP1Test
| testSaveAsP1 | 2.460 s | |
| testSaveAsP1Help | 0.039 s |
VolumeTest
| testGaussVolEthylbenzene | 0.103 s | |
| testConnollyVDWCrambin | 0.299 s | |
| testGaussVolButane | 0.089 s | |
| testConnollySEVHydrogenCrambin | 0.709 s | |
| testConnollyMolecularHydrogenCrambin | 0.546 s | |
| testConnollyMolecularEthylbenzene | 0.121 s | |
| testConnollySEVHydrogenEthylbenzeneDerivatives | 3.802 s | |
| testConnollyMolecularHydrogenEthylbenzene | 0.083 s | |
| testGaussVolCrambin | 0.259 s | |
| testConnollySEVCrambin | 0.299 s | |
| testConnollyMolecularHydrogenButane | 0.092 s | |
| testGaussVolHydrogenEthylbenzeneDerivatives | 3.871 s | |
| testGaussVolCrambinDerivatives | 2.653 s | |
| testConnollySEVHydrogenButane | 0.090 s | |
| testConnollySEVHydrogenEthylbenzene | 0.082 s | |
| testConnollySEVButane | 0.095 s | |
| testConnollyMolecularCrambin | 0.312 s | |
| testConnollySEVEthylbenzene | 0.114 s | |
| testConnollyMolecularButane | 0.097 s |
SwitchFunctionTest
| testPowerInterpolation | 0.073 s | |
| multSwitchTest | 0.028 s | |
| trigTest | 0.048 s |
EnergyTest
SolvatorTest
| testSolvator[0] | 0.043 s | |
| testSolvator[1] | 0.300 s | |
| testSolvator[2] | 0.446 s | |
| testSolvator[3] | 0.364 s |
MSNodeTest
| MSNode_equals | 0.001 s | |
| MSNode_constructor | 0 s | |
| MSNode_destroy | 0 s |
TorsionTest
| Torsion_constructor | 0.005 s |
BiotypeTest
| testBiotype | 0.088 s | |
| testBiotypeHelp | 0.031 s |
PhGradientTest
| testEndStateEnergyAndGradient[0] | 1.514 s | |
| testEndStateEnergyAndGradient[1] | 1.853 s |
LoopClosureTest
| loopTest[0] | 0.847 s |
PrepareSpaceGroupsTest
| testPrepareSpaceGroups | 12.23 s | |
| testPrepareSpaceGroupsAChiral | 9.170 s | |
| testPrepareSpaceGroupHelp | 0.034 s | |
| testPrepareSpaceGroupsChiral | 3.539 s |
BondTest
| Bond_formsAngleWith | 0.001 s | |
| Bond_getCommonAtom | 0.001 s | |
| Bond_constructor | 0.001 s | |
| Bond_update | 0.001 s | |
| Bond_getOtherAtom2 | 0.001 s | |
| Bond_getOtherAtom | 0 s |
SaveAsXYZTest
| testSaveAsXYZHelp | 0.044 s | |
| testSaveAsXYZ | 0.293 s |
NeckIntegralTest
| testSettingConstants | 0.017 s |
Frac2CartTest
| testFrac2CartHelp | 0.040 s | |
| testFrac2Cart | 0.159 s |
SaveAsPDBTest
| testSaveAsPDBHelp | 0.027 s | |
| testSaveAsPDB | 0.197 s |
ImportCIFTest
| testImportCIFarc | 0.136 s | |
| testImportCIFpdb | 0.121 s | |
| testImportCIFWriteAsCIF | 0.038 s | |
| testImportCIFzPrimeChallenge | 0.090 s | |
| testImportCIFHelp | 0.031 s | |
| testImportCIFNoHydrogen | 0.049 s | |
| testImportCIF | 0.053 s | |
| testImportCIFdisulfide | 0.055 s | |
| testImportCIFMultipleMolecules | 0.093 s |
AtomTest
| Atom_constructor3 | 0.001 s | |
| Atom_constructor4 | 0.001 s | |
| Atom_constructor | 0 s | |
| Atom_getBond | 0 s | |
| Atom_addTrajectoryCoords | 0.001 s | |
| Atom_equals | 0.001 s | |
| Atom_getNumBonds | 0.001 s | |
| Atom_destroy | 0 s | |
| Atom_isBonded | 0.001 s |
AnnealTest
| testSimulatedAnnealing[0] | 5.729 s |
ManyBodyTest
| testManyBodyBoxOptimization | 8.875 s | |
| testManyBodyBoxRestart | 12.54 s | |
| testManyBodyRestart | 19.55 s | |
| testManyBodyTitration | 10.11 s | |
| testManyBodyGlobal | 23.19 s | |
| testManyBodyMonteCarlo | 10.93 s | |
| testManyBodyHelp | 0.041 s |
DynamicsNVETest
| testDynamicsNVE[0] | 0.633 s | |
| testDynamicsHelp[0] | 0.036 s |
BARDualTopologyTest
| testBARHelp | 0.053 s |
MBARFilesTest
| testMBARFiles | 0.027 s |
DynamicsStochasticTest
ThermodynamicsTest
| testThermodynamics[0] | 0.071 s | |
| testThermodynamics[1] | 0.034 s | |
| testThermodynamics[2] | 0.034 s | |
| testThermodynamics[3] | 0.036 s | |
| testThermodynamics[4] | 0.034 s | |
| testThermodynamics[5] | 0.034 s | |
| testThermodynamics[6] | 0.040 s | |
| testThermodynamics[7] | 0.036 s | |
| testThermodynamics[8] | 0.197 s | |
| testThermodynamics[9] | 0.028 s | |
| testThermodynamics[10] | 0.033 s | |
| testThermodynamics[11] | 0.030 s | |
| testThermodynamics[12] | 0.173 s | |
| testThermodynamics[13] | 0.032 s | |
| testThermodynamics[14] | 0.031 s | |
| testThermodynamics[15] | 0.027 s | |
| testThermodynamics[16] | 0.076 s | |
| testThermodynamics[17] | 0.033 s | |
| testThermodynamics[18] | 0.029 s | |
| testThermodynamics[19] | 0.032 s | |
| testThermodynamics[20] | 0.033 s |
PhRepexTest
| testPhRepexExchangeValidity | 1.768 s | |
| testPhRepexRestarts | 1.536 s |
MinimizeTest
| testMinimizeIterations | 0.759 s | |
| testMinimizeConvergenceCriteria | 0.693 s | |
| testMinimizeHelp | 0.041 s |
BARSingleTopologyTest
| testBARHelp | 0.046 s |
MinimizeCrystalsTest
| testCrystalMinFractional | 0.661 s | |
| testCrystalMinHelp | 0.045 s | |
| testCrystalMinCoords | 0.261 s | |
| testCrystalMinConvergenceCriteria | 0.944 s | |
| testCrystalMinIterations | 0.796 s |
BARFilesTest
| testBARHelp | 0.044 s |
GenZTest
| testGenZHelp | 0.044 s | |
| testGenZ | 0.032 s |
DynamicsRESPANVETest
| testRESPANVE[0] | 2.056 s |
DynamicsOpenMMRESPANVETest
| testDynamicsOpenMMRESPANVE[0] | 0.031 s |
SuperposeCrystalsTest
DynamicsBeemanBerendsenTest
| testDynamicsBeemanBerendsen[0] | 0.539 s |
ClusterTest
| testClusterHelp | 0.049 s | |
| testBaseCluster | 0.093 s |
DynamicsInitVelocitiesTest
| testDynamicsInitVelocities[0] | 0.879 s |
OSTGradientTest
| testOSTGradient[0] | 1.457 s | |
| testMetaDynamicsGradient[0] | 1.065 s | |
| testOSTBiasHelp[0] | 0.048 s |
DynamicsNVTTest
| testDynamicsNVT[0] | 15.53 s |
RotamerOptimizationTest
| testSelfEnergyElimination[0] | 2.620 s | |
| testPairEnergyElimination[0] | 1.355 s | |
| testSelfEnergyElimination[1] | 0.768 s | |
| testPairEnergyElimination[1] | 0.785 s | |
| testSelfEnergyElimination[2] | 0.800 s | |
| testPairEnergyElimination[2] | 0.792 s | |
| testSelfEnergyElimination[3] | 1.060 s | |
| testPairEnergyElimination[3] | 1.127 s | |
| testSelfEnergyElimination[4] | 0.805 s | |
| testPairEnergyElimination[4] | 0.870 s | |
| testSelfEnergyElimination[5] | 0.733 s | |
| testPairEnergyElimination[5] | 0.772 s | |
| testSelfEnergyElimination[6] | 0.723 s | |
| testPairEnergyElimination[6] | 0.760 s | |
| testSelfEnergyElimination[7] | 1.083 s | |
| testPairEnergyElimination[7] | 0.883 s |
DynamicsOpenMMStochasticTest
| testDynamicsOpenMMStochastic[0] | 0.036 s |
CIFFilterTest
| testCIFFilter2DRM | 0.383 s | |
| testCIFFilter3DYC | 0.950 s |
CrystalReciprocalSpaceTest
| test1NSFPermanent | 1.897 s | |
| test1N7SPermanent | 2.170 s |
FormFactorTest
| testCarbonfrho | 0.026 s | |
| testCarbonFF | 0.033 s | |
| testFormFactors3G | 0.032 s | |
| testFormFactors | 0.036 s |
XRayMinimizeTest
| testSplineFCTOESQ[0] | 3.707 s | |
| testSplineFOTOESQ[0] | 3.408 s | |
| testSplineF1F2[0] | 3.543 s | |
| testSplineFOFC[0] | 3.349 s | |
| testScaleBulk[0] | 3.335 s | |
| testSigmaA[0] | 4.052 s | |
| testCrystalStats[0] | 3.273 s | |
| testSplineFCTOESQ[1] | 5.449 s | |
| testSplineFOTOESQ[1] | 5.638 s | |
| testSplineF1F2[1] | 5.573 s | |
| testSplineFOFC[1] | 5.407 s | |
| testScaleBulk[1] | 5.200 s | |
| testSigmaA[1] | 6.343 s | |
| testCrystalStats[1] | 5.278 s |
RealspaceManyBodyTest
| testManyBodyHelp | 0.393 s |
XRayGradientTest
| test1N7SBFactorsGradient | 18.66 s | |
| test1N7SXYZGradient | 19.56 s | |
| testAlametXYZGradient | 12.54 s | |
| testGradientHelp | 0.045 s |
MTZFilterTest
| testMTZParams | 1.023 s | |
| testMTZReflectionList | 0.087 s | |
| testMTZReadFile | 0.575 s | |
| testMTZHKL | 0.560 s |
XRayManyBodyTest
| testManyBodyGlobal | 20.68 s | |
| testManyBodyHelp | 0.051 s |

