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Surefire Report

Summary

[Summary] [Package List] [Test Cases]


Tests Errors Failures Skipped Success Rate Time
779 0 0 0 100% 438.5 s

Note: failures are anticipated and checked for with assertions while errors are unanticipated.


Package List

[Summary] [Package List] [Test Cases]


Package Tests Errors Failures Skipped Success Rate Time
ffx.algorithms.commands 85 0 0 0 100% 125.8 s
ffx.potential.nonbonded 1 0 0 0 100% 0.015 s
ffx.potential.utils 3 0 0 0 100% 0.150 s
ffx.xray.parsers 6 0 0 0 100% 3.547 s
ffx.numerics.estimator 1 0 0 0 100% 6.007 s
ffx.numerics.spline 14 0 0 0 100% 0.188 s
ffx.numerics.integrate 7 0 0 0 100% 0.183 s
ffx.potential.commands 175 0 0 0 100% 133.0 s
ffx.numerics.func1d 2 0 0 0 100% 0.033 s
ffx.numerics.multipole 68 0 0 0 100% 0.862 s
ffx.numerics.quickhull 2 0 0 0 100% 1.057 s
ffx.numerics.special 193 0 0 0 100% 3.347 s
ffx.xray 26 0 0 0 100% 138.5 s
ffx.realspace 1 0 0 0 100% 0.364 s
ffx.potential.parsers 1 0 0 0 100% 0.645 s
ffx.numerics.math 10 0 0 0 100% 0.191 s
ffx.openmm 2 0 0 0 100% 0.011 s
ffx.numerics.fft 115 0 0 0 100% 2.885 s
ffx.crystal 13 0 0 0 100% 0.502 s
ffx.utilities 2 0 0 0 100% 0.029 s
ffx.algorithms.optimize 18 0 0 0 100% 18.54 s
ffx.numerics.clustering 12 0 0 0 100% 1.958 s
ffx.potential.bonded 22 0 0 0 100% 0.732 s

Note: package statistics are not computed recursively, they only sum up all of its testsuites numbers.

ffx.algorithms.commands

- Class Tests Errors Failures Skipped Success Rate Time
AnnealTest 1 0 0 0 100% 5.728 s
ManyBodyTest 7 0 0 0 100% 87.06 s
DynamicsNVETest 2 0 0 0 100% 0.784 s
BARDualTopologyTest 1 0 0 0 100% 0.032 s
MBARFilesTest 1 0 0 0 100% 0.031 s
DynamicsStochasticTest 9 0 0 0 100% 1.533 s
ThermodynamicsTest 21 0 0 0 100% 1.089 s
MinimizeTest 3 0 0 0 100% 1.554 s
BARSingleTopologyTest 1 0 0 0 100% 0.048 s
MinimizeCrystalsTest 5 0 0 0 100% 2.893 s
BARFilesTest 1 0 0 0 100% 0.032 s
GenZTest 2 0 0 0 100% 0.089 s
DynamicsRESPANVETest 1 0 0 0 100% 2.349 s
DynamicsOpenMMRESPANVETest 1 0 0 0 100% 0.020 s
SuperposeCrystalsTest 20 0 0 0 100% 3.002 s
DynamicsBeemanBerendsenTest 1 0 0 0 100% 0.457 s
ClusterTest 2 0 0 0 100% 0.138 s
DynamicsInitVelocitiesTest 1 0 0 0 100% 0.897 s
OSTGradientTest 3 0 0 0 100% 2.622 s
DynamicsNVTTest 1 0 0 0 100% 15.39 s
DynamicsOpenMMStochasticTest 1 0 0 0 100% 0.028 s

ffx.potential.nonbonded

- Class Tests Errors Failures Skipped Success Rate Time
NeckIntegralTest 1 0 0 0 100% 0.015 s

ffx.potential.utils

- Class Tests Errors Failures Skipped Success Rate Time
SwitchFunctionTest 3 0 0 0 100% 0.150 s

ffx.xray.parsers

- Class Tests Errors Failures Skipped Success Rate Time
CIFFilterTest 2 0 0 0 100% 1.287 s
MTZFilterTest 4 0 0 0 100% 2.260 s

ffx.numerics.estimator

- Class Tests Errors Failures Skipped Success Rate Time
MBARHarmonicOscillatorsTest 1 0 0 0 100% 6.007 s

ffx.numerics.spline

- Class Tests Errors Failures Skipped Success Rate Time
UniformBSplineTest 14 0 0 0 100% 0.188 s

ffx.numerics.integrate

- Class Tests Errors Failures Skipped Success Rate Time
Integrate1DTest 6 0 0 0 100% 0.163 s
IntegrationTest 1 0 0 0 100% 0.020 s

ffx.potential.commands

- Class Tests Errors Failures Skipped Success Rate Time
Cart2FracTest 2 0 0 0 100% 0.132 s
MoveIntoUnitCellTest 2 0 0 0 100% 0.199 s
GKEnergyTest 32 0 0 0 100% 7.430 s
LambdaGradientTest 4 0 0 0 100% 36.49 s
TimerTest 2 0 0 0 100% 7.387 s
ExportQETest 2 0 0 0 100% 0.113 s
OPLSAAEnergyTest 21 0 0 0 100% 9.192 s
FFtoXMLTest 2 0 0 0 100% 0.309 s
SaveAsP1Test 2 0 0 0 100% 2.433 s
VolumeTest 19 0 0 0 100% 13.86 s
EnergyTest 60 0 0 0 100% 23.65 s
SolvatorTest 4 0 0 0 100% 1.218 s
BiotypeTest 2 0 0 0 100% 0.129 s
PhGradientTest 2 0 0 0 100% 3.023 s
PrepareSpaceGroupsTest 4 0 0 0 100% 25.92 s
SaveAsXYZTest 2 0 0 0 100% 0.416 s
Frac2CartTest 2 0 0 0 100% 0.155 s
SaveAsPDBTest 2 0 0 0 100% 0.220 s
ImportCIFTest 9 0 0 0 100% 0.738 s

ffx.numerics.func1d

- Class Tests Errors Failures Skipped Success Rate Time
QuasiLinearSwitchTest 2 0 0 0 100% 0.033 s

ffx.numerics.multipole

- Class Tests Errors Failures Skipped Success Rate Time
GKTensorQITest 12 0 0 0 100% 0.127 s
MultipoleTensorQITest 15 0 0 0 100% 0.216 s
MultipoleTensorTest 6 0 0 0 100% 0.077 s
MultipoleTensorQISIMDTest 2 0 0 0 100% 0.001 s
MultipoleTensorGlobalSIMDTest 2 0 0 0 100% 0.041 s
CombinedTensorTest 2 0 0 0 100% 0.001 s
GKTensorGlobalTest 12 0 0 0 100% 0.170 s
AMOEBAPlusMultipoleTensorGlobalTest 2 0 0 0 100% 0 s
MultipoleTensorGlobalTest 15 0 0 0 100% 0.229 s

ffx.numerics.quickhull

- Class Tests Errors Failures Skipped Success Rate Time
ConvexHullTest 1 0 0 0 100% 0.009 s
QuickHull3DTest 1 0 0 0 100% 1.048 s

ffx.numerics.special

- Class Tests Errors Failures Skipped Success Rate Time
ErfTest 68 0 0 0 100% 1.175 s
ModifiedBesselTest 125 0 0 0 100% 2.172 s

ffx.xray

- Class Tests Errors Failures Skipped Success Rate Time
CrystalReciprocalSpaceTest 2 0 0 0 100% 4.128 s
FormFactorTest 4 0 0 0 100% 0.129 s
XRayMinimizeTest 14 0 0 0 100% 63.01 s
XRayGradientTest 4 0 0 0 100% 50.74 s
XRayManyBodyTest 2 0 0 0 100% 20.50 s

ffx.realspace

- Class Tests Errors Failures Skipped Success Rate Time
RealspaceManyBodyTest 1 0 0 0 100% 0.364 s

ffx.potential.parsers

- Class Tests Errors Failures Skipped Success Rate Time
ForceFieldFilterTest 1 0 0 0 100% 0.645 s

ffx.numerics.math

- Class Tests Errors Failures Skipped Success Rate Time
SquareRootTest 10 0 0 0 100% 0.191 s

ffx.openmm

- Class Tests Errors Failures Skipped Success Rate Time
OpenMMHarmonicBondTest 2 0 0 0 100% 0.011 s

ffx.numerics.fft

- Class Tests Errors Failures Skipped Success Rate Time
Real3DTest 4 0 0 0 100% 0.144 s
Complex3DParallelTest 8 0 0 0 100% 0.494 s
Complex3DTest 4 0 0 0 100% 0.148 s
Real3DParallelTest 8 0 0 0 100% 0.254 s
ComplexTest 72 0 0 0 100% 1.527 s
Complex2DTest 16 0 0 0 100% 0.268 s
RealTest 3 0 0 0 100% 0.050 s

ffx.crystal

- Class Tests Errors Failures Skipped Success Rate Time
ReflectionListTest 6 0 0 0 100% 0.410 s
CrystalVolumeDerivativeTest 7 0 0 0 100% 0.092 s

ffx.utilities

- Class Tests Errors Failures Skipped Success Rate Time
Hybrid36Test 2 0 0 0 100% 0.029 s

ffx.algorithms.optimize

- Class Tests Errors Failures Skipped Success Rate Time
PhRepexTest 2 0 0 0 100% 2.923 s
RotamerOptimizationTest 16 0 0 0 100% 15.62 s

ffx.numerics.clustering

- Class Tests Errors Failures Skipped Success Rate Time
DistanceMapTest 4 0 0 0 100% 0.033 s
ClusterTest 2 0 0 0 100% 0.007 s
ClusterPerfTest 3 0 0 0 100% 1.869 s
DefaultClusteringAlgorithmTest 2 0 0 0 100% 0.045 s
WeightedClusteringAlgorithmTest 1 0 0 0 100% 0.004 s

ffx.potential.bonded

- Class Tests Errors Failures Skipped Success Rate Time
AngleTest 2 0 0 0 100% 0 s
MSNodeTest 3 0 0 0 100% 0.001 s
TorsionTest 1 0 0 0 100% 0.001 s
LoopClosureTest 1 0 0 0 100% 0.729 s
BondTest 6 0 0 0 100% 0 s
AtomTest 9 0 0 0 100% 0.001 s

Test Cases

[Summary] [Package List] [Test Cases]

Hybrid36Test

testDecode 0.001 s
testEncode 0.016 s

ErfTest

testErf[0] 0.009 s
testErfc[0] 0.017 s
testErfcSpecialCases[0] 0.019 s
testErfSpecialCases[0] 0.017 s
testErf[1] 0.017 s
testErfc[1] 0.017 s
testErfcSpecialCases[1] 0.019 s
testErfSpecialCases[1] 0.017 s
testErf[2] 0.019 s
testErfc[2] 0.017 s
testErfcSpecialCases[2] 0.017 s
testErfSpecialCases[2] 0.018 s
testErf[3] 0.020 s
testErfc[3] 0.017 s
testErfcSpecialCases[3] 0.017 s
testErfSpecialCases[3] 0.017 s
testErf[4] 0.017 s
testErfc[4] 0.017 s
testErfcSpecialCases[4] 0.018 s
testErfSpecialCases[4] 0.016 s
testErf[5] 0.018 s
testErfc[5] 0.018 s
testErfcSpecialCases[5] 0.017 s
testErfSpecialCases[5] 0.016 s
testErf[6] 0.014 s
testErfc[6] 0.012 s
testErfcSpecialCases[6] 0.014 s
testErfSpecialCases[6] 0.015 s
testErf[7] 0.016 s
testErfc[7] 0.016 s
testErfcSpecialCases[7] 0.017 s
testErfSpecialCases[7] 0.016 s
testErf[8] 0.015 s
testErfc[8] 0.017 s
testErfcSpecialCases[8] 0.020 s
testErfSpecialCases[8] 0.017 s
testErf[9] 0.017 s
testErfc[9] 0.017 s
testErfcSpecialCases[9] 0.016 s
testErfSpecialCases[9] 0.019 s
testErf[10] 0.019 s
testErfc[10] 0.017 s
testErfcSpecialCases[10] 0.017 s
testErfSpecialCases[10] 0.019 s
testErf[11] 0.017 s
testErfc[11] 0.017 s
testErfcSpecialCases[11] 0.018 s
testErfSpecialCases[11] 0.017 s
testErf[12] 0.017 s
testErfc[12] 0.017 s
testErfcSpecialCases[12] 0.016 s
testErfSpecialCases[12] 0.016 s
testErf[13] 0.017 s
testErfc[13] 0.017 s
testErfcSpecialCases[13] 0.018 s
testErfSpecialCases[13] 0.020 s
testErf[14] 0.017 s
testErfc[14] 0.019 s
testErfcSpecialCases[14] 0.017 s
testErfSpecialCases[14] 0.019 s
testErf[15] 0.017 s
testErfc[15] 0.017 s
testErfcSpecialCases[15] 0.016 s
testErfSpecialCases[15] 0.018 s
testErf[16] 0.019 s
testErfc[16] 0.018 s
testErfcSpecialCases[16] 0.018 s
testErfSpecialCases[16] 0.019 s

Real3DTest

testConvolution[0] 0.041 s
testFft[0] 0.031 s
testConvolution[1] 0.040 s
testFft[1] 0.032 s

Complex3DParallelTest

testConvolution[0] 0.056 s
testFft[0] 0.050 s
testConvolution[1] 0.042 s
testFft[1] 0.039 s
testConvolution[2] 0.067 s
testFft[2] 0.063 s
testConvolution[3] 0.094 s
testFft[3] 0.080 s

Complex3DTest

testConvolution[0] 0.032 s
testFft[0] 0.029 s
testConvolution[1] 0.046 s
testFft[1] 0.040 s

MBARHarmonicOscillatorsTest

testMBAROscillators 6.006 s

Real3DParallelTest

testConvolution[0] 0.027 s
testFft[0] 0.032 s
testConvolution[1] 0.032 s
testFft[1] 0.033 s
testConvolution[2] 0.033 s
testFft[2] 0.032 s
testConvolution[3] 0.031 s
testFft[3] 0.030 s

QuasiLinearSwitchTest

testPoints[0] 0.016 s
testPoints[1] 0.014 s

GKTensorQITest

polarizationEnergyDirectTest 0.005 s
quadrupoleTensorTest 0.010 s
permanentEnergyAndGradientTest 0.008 s
chargeFiniteDifferenceTest 0.009 s
dipoleFiniteDifferenceTest 0.011 s
dipoleTensorTest 0.009 s
chargeTensorTest 0.011 s
polarizationEnergyAndGradientDirectTest 0.010 s
permanentEnergyTest 0.011 s
tensorAuxiliaryTest 0.013 s
polarizationEnergyTest 0.011 s
polarizationEnergyAndGradientTest 0.014 s

DistanceMapTest

testMapRemovalByObjectPollLoop 0.001 s
testMapWorksWithSameDistance 0.011 s
testMapRemovalFront 0.009 s
testMapRemovalByObjectPollLoopHandlesAllEmpty 0.009 s

SquareRootTest

testInverseSqrt[0] 0.013 s
testSqrt[0] 0.018 s
testInverseSqrt[1] 0.016 s
testSqrt[1] 0.022 s
testInverseSqrt[2] 0.018 s
testSqrt[2] 0.020 s
testInverseSqrt[3] 0.018 s
testSqrt[3] 0.020 s
testInverseSqrt[4] 0.021 s
testSqrt[4] 0.020 s

ClusterTest

testGetTotalDistance 0 s
testCountLeafs 0.003 s

MultipoleTensorQITest

multipoleTensorTest[0] 0.007 s
codeGenerationTest[0] 0.016 s
finiteDifferenceTest[0] 0.017 s
polarizationEnergyAndGradTest[0] 0.013 s
permanentMultipoleEnergyAndGradTest[0] 0.011 s
multipoleTensorTest[1] 0.012 s
codeGenerationTest[1] 0.015 s
finiteDifferenceTest[1] 0.015 s
polarizationEnergyAndGradTest[1] 0.014 s
permanentMultipoleEnergyAndGradTest[1] 0.013 s
multipoleTensorTest[2] 0.013 s
codeGenerationTest[2] 0.013 s
finiteDifferenceTest[2] 0.016 s
polarizationEnergyAndGradTest[2] 0.015 s
permanentMultipoleEnergyAndGradTest[2] 0.015 s

ClusterPerfTest

testRandomDataDist 0.001 s
testRandomDataNames 0.012 s
testn 1.854 s

MultipoleTensorTest

tensorCountTest[0] 0.006 s
tensorIndexTest[0] 0.012 s
tensorCountTest[1] 0.015 s
tensorIndexTest[1] 0.014 s
tensorCountTest[2] 0.013 s
tensorIndexTest[2] 0.014 s

ComplexTest

testInterleavedSIMDNFFT[0] 0.087 s
testBlockedScalarNFFT[0] 0.035 s
testInterleavedScalarNFFT[0] 0.035 s
testInterleavedScalar[0] 0.021 s
testBlockedSIMDNFFT[0] 0.045 s
testBlockedSIMD[0] 0.022 s
testBlockedScalar[0] 0.014 s
testInterleavedSIMD[0] 0.015 s
testPreferredDimension[0] 0.015 s
testInterleavedSIMDNFFT[1] 0.038 s
testBlockedScalarNFFT[1] 0.032 s
testInterleavedScalarNFFT[1] 0.031 s
testInterleavedScalar[1] 0.014 s
testBlockedSIMDNFFT[1] 0.039 s
testBlockedSIMD[1] 0.014 s
testBlockedScalar[1] 0.018 s
testInterleavedSIMD[1] 0.023 s
testPreferredDimension[1] 0.015 s
testInterleavedSIMDNFFT[2] 0.039 s
testBlockedScalarNFFT[2] 0.022 s
testInterleavedScalarNFFT[2] 0.020 s
testInterleavedScalar[2] 0.012 s
testBlockedSIMDNFFT[2] 0.027 s
testBlockedSIMD[2] 0.014 s
testBlockedScalar[2] 0.014 s
testInterleavedSIMD[2] 0.012 s
testPreferredDimension[2] 0.010 s
testInterleavedSIMDNFFT[3] 0.021 s
testBlockedScalarNFFT[3] 0.021 s
testInterleavedScalarNFFT[3] 0.020 s
testInterleavedScalar[3] 0.017 s
testBlockedSIMDNFFT[3] 0.025 s
testBlockedSIMD[3] 0.015 s
testBlockedScalar[3] 0.019 s
testInterleavedSIMD[3] 0.014 s
testPreferredDimension[3] 0.013 s
testInterleavedSIMDNFFT[4] 0.019 s
testBlockedScalarNFFT[4] 0.015 s
testInterleavedScalarNFFT[4] 0.017 s
testInterleavedScalar[4] 0.017 s
testBlockedSIMDNFFT[4] 0.019 s
testBlockedSIMD[4] 0.018 s
testBlockedScalar[4] 0.021 s
testInterleavedSIMD[4] 0.015 s
testPreferredDimension[4] 0.016 s
testInterleavedSIMDNFFT[5] 0.022 s
testBlockedScalarNFFT[5] 0.017 s
testInterleavedScalarNFFT[5] 0.015 s
testInterleavedScalar[5] 0.016 s
testBlockedSIMDNFFT[5] 0.020 s
testBlockedSIMD[5] 0.018 s
testBlockedScalar[5] 0.020 s
testInterleavedSIMD[5] 0.018 s
testPreferredDimension[5] 0.018 s
testInterleavedSIMDNFFT[6] 0.027 s
testBlockedScalarNFFT[6] 0.019 s
testInterleavedScalarNFFT[6] 0.023 s
testInterleavedScalar[6] 0.018 s
testBlockedSIMDNFFT[6] 0.017 s
testBlockedSIMD[6] 0.017 s
testBlockedScalar[6] 0.017 s
testInterleavedSIMD[6] 0.019 s
testPreferredDimension[6] 0.019 s
testInterleavedSIMDNFFT[7] 0.019 s
testBlockedScalarNFFT[7] 0.017 s
testInterleavedScalarNFFT[7] 0.019 s
testInterleavedScalar[7] 0.019 s
testBlockedSIMDNFFT[7] 0.016 s
testBlockedSIMD[7] 0.018 s
testBlockedScalar[7] 0.017 s
testInterleavedSIMD[7] 0.018 s
testPreferredDimension[7] 0.020 s

MultipoleTensorQISIMDTest

polarizationEnergyAndGradientTest[0] 0 s
permanentMultipoleEnergyAndGradTest[0] 0 s

MultipoleTensorGlobalSIMDTest

polarizationEnergyAndGradientTest[0] 0.037 s
permanentMultipoleEnergyAndGradTest[0] 0.003 s

DefaultClusteringAlgorithmTest

testDuplicateNames 0.020 s
testClusteringAvgLink 0.014 s

CombinedTensorTest

polarizationEnergyAndGradientTest[0] 0 s
permanentMultipoleEnergyAndGradTest[0] 0 s

Complex2DTest

testInterleavedScalar[0] 0.013 s
testBlockedScalarPacked[0] 0.018 s
testBlockedSIMDPacked[0] 0.023 s
testInterleavedSIMDPacked[0] 0.019 s
testBlockedSIMD[0] 0.017 s
testBlockedScalar[0] 0.016 s
testInterleavedSIMD[0] 0.018 s
testInterleavedScalarPacked[0] 0.018 s
testInterleavedScalar[1] 0.016 s
testBlockedScalarPacked[1] 0.015 s
testBlockedSIMDPacked[1] 0.015 s
testInterleavedSIMDPacked[1] 0.019 s
testBlockedSIMD[1] 0.011 s
testBlockedScalar[1] 0.012 s
testInterleavedSIMD[1] 0.022 s
testInterleavedScalarPacked[1] 0.013 s

GKTensorGlobalTest

polarizationEnergyDirectTest 0.006 s
quadrupoleTensorTest 0.013 s
permanentEnergyAndGradientTest 0.012 s
chargeFiniteDifferenceTest 0.019 s
dipoleFiniteDifferenceTest 0.012 s
dipoleTensorTest 0.013 s
chargeTensorTest 0.015 s
polarizationEnergyAndGradientDirectTest 0.016 s
permanentEnergyTest 0.014 s
tensorAuxiliaryTest 0.014 s
polarizationEnergyTest 0.013 s
polarizationEnergyAndGradientTest 0.015 s

Integrate1DTest

castToDoubleSetTest 0.033 s
testSinCosine 0.057 s
parallelTest 0.024 s
polynomialTest 0.012 s
testByBinIntegral 0.016 s
polynomialGrinderTest 0.017 s

ModifiedBesselTest

testFirstOrderModifiedBessel[0] 0.015 s
testZeroOrderModifiedBessel[0] 0.018 s
testlnI0[0] 0.019 s
testSpecialValues[0] 0.018 s
testi1OverI0[0] 0.017 s
testFirstOrderModifiedBessel[1] 0.019 s
testZeroOrderModifiedBessel[1] 0.017 s
testlnI0[1] 0.018 s
testSpecialValues[1] 0.018 s
testi1OverI0[1] 0.018 s
testFirstOrderModifiedBessel[2] 0.017 s
testZeroOrderModifiedBessel[2] 0.018 s
testlnI0[2] 0.017 s
testSpecialValues[2] 0.016 s
testi1OverI0[2] 0.016 s
testFirstOrderModifiedBessel[3] 0.016 s
testZeroOrderModifiedBessel[3] 0.017 s
testlnI0[3] 0.017 s
testSpecialValues[3] 0.017 s
testi1OverI0[3] 0.017 s
testFirstOrderModifiedBessel[4] 0.017 s
testZeroOrderModifiedBessel[4] 0.017 s
testlnI0[4] 0.018 s
testSpecialValues[4] 0.018 s
testi1OverI0[4] 0.016 s
testFirstOrderModifiedBessel[5] 0.016 s
testZeroOrderModifiedBessel[5] 0.016 s
testlnI0[5] 0.016 s
testSpecialValues[5] 0.016 s
testi1OverI0[5] 0.017 s
testFirstOrderModifiedBessel[6] 0.017 s
testZeroOrderModifiedBessel[6] 0.016 s
testlnI0[6] 0.019 s
testSpecialValues[6] 0.018 s
testi1OverI0[6] 0.018 s
testFirstOrderModifiedBessel[7] 0.018 s
testZeroOrderModifiedBessel[7] 0.016 s
testlnI0[7] 0.017 s
testSpecialValues[7] 0.018 s
testi1OverI0[7] 0.017 s
testFirstOrderModifiedBessel[8] 0.015 s
testZeroOrderModifiedBessel[8] 0.016 s
testlnI0[8] 0.017 s
testSpecialValues[8] 0.018 s
testi1OverI0[8] 0.018 s
testFirstOrderModifiedBessel[9] 0.017 s
testZeroOrderModifiedBessel[9] 0.017 s
testlnI0[9] 0.018 s
testSpecialValues[9] 0.018 s
testi1OverI0[9] 0.017 s
testFirstOrderModifiedBessel[10] 0.016 s
testZeroOrderModifiedBessel[10] 0.015 s
testlnI0[10] 0.018 s
testSpecialValues[10] 0.018 s
testi1OverI0[10] 0.017 s
testFirstOrderModifiedBessel[11] 0.016 s
testZeroOrderModifiedBessel[11] 0.016 s
testlnI0[11] 0.016 s
testSpecialValues[11] 0.017 s
testi1OverI0[11] 0.018 s
testFirstOrderModifiedBessel[12] 0.019 s
testZeroOrderModifiedBessel[12] 0.018 s
testlnI0[12] 0.015 s
testSpecialValues[12] 0.017 s
testi1OverI0[12] 0.017 s
testFirstOrderModifiedBessel[13] 0.017 s
testZeroOrderModifiedBessel[13] 0.018 s
testlnI0[13] 0.018 s
testSpecialValues[13] 0.018 s
testi1OverI0[13] 0.018 s
testFirstOrderModifiedBessel[14] 0.019 s
testZeroOrderModifiedBessel[14] 0.017 s
testlnI0[14] 0.017 s
testSpecialValues[14] 0.018 s
testi1OverI0[14] 0.018 s
testFirstOrderModifiedBessel[15] 0.018 s
testZeroOrderModifiedBessel[15] 0.017 s
testlnI0[15] 0.018 s
testSpecialValues[15] 0.018 s
testi1OverI0[15] 0.017 s
testFirstOrderModifiedBessel[16] 0.016 s
testZeroOrderModifiedBessel[16] 0.016 s
testlnI0[16] 0.019 s
testSpecialValues[16] 0.017 s
testi1OverI0[16] 0.015 s
testFirstOrderModifiedBessel[17] 0.018 s
testZeroOrderModifiedBessel[17] 0.015 s
testlnI0[17] 0.015 s
testSpecialValues[17] 0.018 s
testi1OverI0[17] 0.017 s
testFirstOrderModifiedBessel[18] 0.016 s
testZeroOrderModifiedBessel[18] 0.017 s
testlnI0[18] 0.017 s
testSpecialValues[18] 0.017 s
testi1OverI0[18] 0.017 s
testFirstOrderModifiedBessel[19] 0.020 s
testZeroOrderModifiedBessel[19] 0.016 s
testlnI0[19] 0.017 s
testSpecialValues[19] 0.016 s
testi1OverI0[19] 0.017 s
testFirstOrderModifiedBessel[20] 0.017 s
testZeroOrderModifiedBessel[20] 0.017 s
testlnI0[20] 0.016 s
testSpecialValues[20] 0.017 s
testi1OverI0[20] 0.017 s
testFirstOrderModifiedBessel[21] 0.019 s
testZeroOrderModifiedBessel[21] 0.019 s
testlnI0[21] 0.018 s
testSpecialValues[21] 0.019 s
testi1OverI0[21] 0.017 s
testFirstOrderModifiedBessel[22] 0.018 s
testZeroOrderModifiedBessel[22] 0.018 s
testlnI0[22] 0.018 s
testSpecialValues[22] 0.017 s
testi1OverI0[22] 0.017 s
testFirstOrderModifiedBessel[23] 0.017 s
testZeroOrderModifiedBessel[23] 0.020 s
testlnI0[23] 0.017 s
testSpecialValues[23] 0.017 s
testi1OverI0[23] 0.019 s
testFirstOrderModifiedBessel[24] 0.019 s
testZeroOrderModifiedBessel[24] 0.018 s
testlnI0[24] 0.016 s
testSpecialValues[24] 0.016 s
testi1OverI0[24] 0.016 s

AMOEBAPlusMultipoleTensorGlobalTest

inducedDipoleEnergyAndGradient[0] 0 s
permanentMultipoleEnergyAndGradTest[0] 0 s

ConvexHullTest

testConvexHull 0.008 s

MultipoleTensorGlobalTest

multipoleTensorTest[0] 0.015 s
finiteDifferenceTest[0] 0.013 s
codingGenerationTest[0] 0.021 s
polarizationEnergyAndGradTest[0] 0.011 s
permanentMultipoleEnergyAndGradTest[0] 0.014 s
multipoleTensorTest[1] 0.022 s
finiteDifferenceTest[1] 0.012 s
codingGenerationTest[1] 0.013 s
polarizationEnergyAndGradTest[1] 0.015 s
permanentMultipoleEnergyAndGradTest[1] 0.017 s
multipoleTensorTest[2] 0.014 s
finiteDifferenceTest[2] 0.015 s
codingGenerationTest[2] 0.015 s
polarizationEnergyAndGradTest[2] 0.014 s
permanentMultipoleEnergyAndGradTest[2] 0.013 s

QuickHull3DTest

doTest 1.047 s

IntegrationTest

integrationTest 0.017 s

WeightedClusteringAlgorithmTest

testClusteringAvgLink 0.001 s

UniformBSplineTest

testBSpline[0] 0.010 s
testBSplineDerivatives[0] 0.007 s
testBSpline[1] 0.010 s
testBSplineDerivatives[1] 0.011 s
testBSpline[2] 0.010 s
testBSplineDerivatives[2] 0.015 s
testBSpline[3] 0.015 s
testBSplineDerivatives[3] 0.015 s
testBSpline[4] 0.015 s
testBSplineDerivatives[4] 0.015 s
testBSpline[5] 0.013 s
testBSplineDerivatives[5] 0.015 s
testBSpline[6] 0.015 s
testBSplineDerivatives[6] 0.015 s

RealTest

testFft[0] 0.009 s
testFft[1] 0.018 s
testFft[2] 0.019 s

ReflectionListTest

testreflections[0] 0.199 s
testsize[0] 0.153 s
testreflections[1] 0.012 s
testsize[1] 0.011 s
testreflections[2] 0.011 s
testsize[2] 0.013 s

CrystalVolumeDerivativeTest

finiteDifferenceTest[0] 0.013 s
finiteDifferenceTest[1] 0.013 s
finiteDifferenceTest[2] 0.011 s
finiteDifferenceTest[3] 0.010 s
finiteDifferenceTest[4] 0.013 s
finiteDifferenceTest[5] 0.011 s
finiteDifferenceTest[6] 0.015 s

OpenMMHarmonicBondTest

testHarmonicBondEnergyAtEquilibriumOpenCL 0.005 s
testHarmonicBondEnergyDisplacedOpenCL 0.001 s

Cart2FracTest

testCart2FractHelp 0.026 s
testCart2Frac 0.105 s

AngleTest

Angle_getCommonBond 0 s
Angle_getOtherBond 0 s

MoveIntoUnitCellTest

testMoveIntoUnitCell 0.168 s
testMoveIntoUnitCellHelp 0.030 s

ForceFieldFilterTest

testParse 0.638 s

GKEnergyTest

testGradient[0] 0.027 s
testLambdaGradient[0] 0.030 s
testEnergy[0] 1.031 s
testOpenMMEnergy[0] 0.024 s
testGradient[1] 0.029 s
testLambdaGradient[1] 0.030 s
testEnergy[1] 0.640 s
testOpenMMEnergy[1] 0.021 s
testGradient[2] 0.026 s
testLambdaGradient[2] 0.040 s
testEnergy[2] 0.904 s
testOpenMMEnergy[2] 0.026 s
testGradient[3] 0.030 s
testLambdaGradient[3] 0.029 s
testEnergy[3] 0.819 s
testOpenMMEnergy[3] 0.023 s
testGradient[4] 0.025 s
testLambdaGradient[4] 0.034 s
testEnergy[4] 0.781 s
testOpenMMEnergy[4] 0.025 s
testGradient[5] 0.032 s
testLambdaGradient[5] 0.035 s
testEnergy[5] 0.958 s
testOpenMMEnergy[5] 0.023 s
testGradient[6] 0.028 s
testLambdaGradient[6] 0.032 s
testEnergy[6] 0.847 s
testOpenMMEnergy[6] 0.023 s
testGradient[7] 0.034 s
testLambdaGradient[7] 0.040 s
testEnergy[7] 0.748 s
testOpenMMEnergy[7] 0.029 s

LambdaGradientTest

testLambdaGradientSymOp 20.92 s
testLambdaGradient 4.086 s
testLambdaGradientHelp 0.034 s
testLambdaGradientIntermolecularSoftcore 11.44 s

TimerTest

testTimer 7.357 s
testTimerHelp 0.029 s

ExportQETest

testXYZtoQEHelp 0.029 s
testXYZtoQE 0.083 s

OPLSAAEnergyTest

testGradient[0] 0.759 s
testLambdaGradient[0] 1.255 s
testEnergy[0] 0.181 s
testGradient[1] 0.686 s
testLambdaGradient[1] 0.867 s
testEnergy[1] 0.187 s
testGradient[2] 0.343 s
testLambdaGradient[2] 0.677 s
testEnergy[2] 0.180 s
testGradient[3] 0.406 s
testLambdaGradient[3] 0.949 s
testEnergy[3] 0.182 s
testGradient[4] 0.243 s
testLambdaGradient[4] 0.463 s
testEnergy[4] 0.136 s
testGradient[5] 0.184 s
testLambdaGradient[5] 0.609 s
testEnergy[5] 0.154 s
testGradient[6] 0.171 s
testLambdaGradient[6] 0.401 s
testEnergy[6] 0.156 s

FFtoXMLTest

testFFtoXMLHelp 0.230 s
testFFtoXML 0.077 s

SaveAsP1Test

testSaveAsP1 2.393 s
testSaveAsP1Help 0.036 s

VolumeTest

testGaussVolEthylbenzene 0.118 s
testConnollyVDWCrambin 0.337 s
testGaussVolButane 0.110 s
testConnollySEVHydrogenCrambin 0.719 s
testConnollyMolecularHydrogenCrambin 0.574 s
testConnollyMolecularEthylbenzene 0.112 s
testConnollySEVHydrogenEthylbenzeneDerivatives 3.358 s
testConnollyMolecularHydrogenEthylbenzene 0.102 s
testGaussVolCrambin 0.250 s
testConnollySEVCrambin 0.286 s
testConnollyMolecularHydrogenButane 0.074 s
testGaussVolHydrogenEthylbenzeneDerivatives 4.703 s
testGaussVolCrambinDerivatives 2.334 s
testConnollySEVHydrogenButane 0.068 s
testConnollySEVHydrogenEthylbenzene 0.122 s
testConnollySEVButane 0.083 s
testConnollyMolecularCrambin 0.290 s
testConnollySEVEthylbenzene 0.120 s
testConnollyMolecularButane 0.102 s

SwitchFunctionTest

testPowerInterpolation 0.067 s
multSwitchTest 0.021 s
trigTest 0.058 s

EnergyTest

testGradient[0] 0.019 s
testLambdaGradient[0] 0.027 s
testEnergy[0] 2.451 s
testOpenMMEnergy[0] 0.036 s
testGradient[1] 0.038 s
testLambdaGradient[1] 0.040 s
testEnergy[1] 0.043 s
testOpenMMEnergy[1] 0.046 s
testGradient[2] 0.039 s
testLambdaGradient[2] 0.037 s
testEnergy[2] 0.039 s
testOpenMMEnergy[2] 0.038 s
testGradient[3] 0.269 s
testLambdaGradient[3] 0.631 s
testEnergy[3] 0.104 s
testOpenMMEnergy[3] 0.024 s
testGradient[4] 0.030 s
testLambdaGradient[4] 0.041 s
testEnergy[4] 0.578 s
testOpenMMEnergy[4] 0.030 s
testGradient[5] 0.428 s
testLambdaGradient[5] 1.210 s
testEnergy[5] 0.162 s
testOpenMMEnergy[5] 0.026 s
testGradient[6] 0.400 s
testLambdaGradient[6] 0.844 s
testEnergy[6] 0.137 s
testOpenMMEnergy[6] 0.024 s
testGradient[7] 0.274 s
testLambdaGradient[7] 0.690 s
testEnergy[7] 0.164 s
testOpenMMEnergy[7] 0.024 s
testGradient[8] 0.033 s
testLambdaGradient[8] 0.029 s
testEnergy[8] 3.010 s
testOpenMMEnergy[8] 0.024 s
testGradient[9] 0.031 s
testLambdaGradient[9] 0.043 s
testEnergy[9] 2.322 s
testOpenMMEnergy[9] 0.028 s
testGradient[10] 0.505 s
testLambdaGradient[10] 1.068 s
testEnergy[10] 0.131 s
testOpenMMEnergy[10] 0.024 s
testGradient[11] 0.633 s
testLambdaGradient[11] 1.506 s
testEnergy[11] 0.199 s
testOpenMMEnergy[11] 0.026 s
testGradient[12] 0.353 s
testLambdaGradient[12] 1.053 s
testEnergy[12] 0.144 s
testOpenMMEnergy[12] 0.023 s
testGradient[13] 0.431 s
testLambdaGradient[13] 1.037 s
testEnergy[13] 0.150 s
testOpenMMEnergy[13] 0.030 s
testGradient[14] 0.551 s
testLambdaGradient[14] 1.088 s
testEnergy[14] 0.183 s
testOpenMMEnergy[14] 0.043 s

SolvatorTest

testSolvator[0] 0.031 s
testSolvator[1] 0.341 s
testSolvator[2] 0.443 s
testSolvator[3] 0.401 s

MSNodeTest

MSNode_equals 0 s
MSNode_constructor 0 s
MSNode_destroy 0 s

TorsionTest

Torsion_constructor 0 s

BiotypeTest

testBiotype 0.098 s
testBiotypeHelp 0.030 s

PhGradientTest

testEndStateEnergyAndGradient[0] 1.448 s
testEndStateEnergyAndGradient[1] 1.574 s

LoopClosureTest

loopTest[0] 0.728 s

PrepareSpaceGroupsTest

testPrepareSpaceGroups 13.10 s
testPrepareSpaceGroupsAChiral 9.012 s
testPrepareSpaceGroupHelp 0.041 s
testPrepareSpaceGroupsChiral 3.758 s

BondTest

Bond_formsAngleWith 0 s
Bond_getCommonAtom 0 s
Bond_constructor 0 s
Bond_update 0 s
Bond_getOtherAtom2 0 s
Bond_getOtherAtom 0 s

SaveAsXYZTest

testSaveAsXYZHelp 0.023 s
testSaveAsXYZ 0.392 s

NeckIntegralTest

testSettingConstants 0.012 s

Frac2CartTest

testFrac2CartHelp 0.026 s
testFrac2Cart 0.127 s

SaveAsPDBTest

testSaveAsPDBHelp 0.019 s
testSaveAsPDB 0.200 s

ImportCIFTest

testImportCIFarc 0.148 s
testImportCIFpdb 0.110 s
testImportCIFWriteAsCIF 0.045 s
testImportCIFzPrimeChallenge 0.093 s
testImportCIFHelp 0.040 s
testImportCIFNoHydrogen 0.051 s
testImportCIF 0.055 s
testImportCIFdisulfide 0.066 s
testImportCIFMultipleMolecules 0.128 s

AtomTest

Atom_constructor3 0 s
Atom_constructor4 0 s
Atom_constructor 0 s
Atom_getBond 0 s
Atom_addTrajectoryCoords 0 s
Atom_equals 0 s
Atom_getNumBonds 0 s
Atom_destroy 0 s
Atom_isBonded 0 s

AnnealTest

testSimulatedAnnealing[0] 5.727 s

ManyBodyTest

testManyBodyBoxOptimization 8.524 s
testManyBodyBoxRestart 12.42 s
testManyBodyRestart 19.05 s
testManyBodyTitration 11.33 s
testManyBodyGlobal 23.82 s
testManyBodyMonteCarlo 11.87 s
testManyBodyHelp 0.049 s

DynamicsNVETest

testDynamicsNVE[0] 0.738 s
testDynamicsHelp[0] 0.044 s

BARDualTopologyTest

testBARHelp 0.030 s

MBARFilesTest

testMBARFiles 0.029 s

DynamicsStochasticTest

testDynamicsStochasticRandomSeed[0] 0.411 s
testDynamicsStochasticRandomSeedFriction0[0] 0.030 s
testDynamicsStochasticRandomSeedFriction01[0] 0.040 s
testDynamicsStochasticRandomSeed[1] 0.042 s
testDynamicsStochasticRandomSeedFriction0[1] 0.436 s
testDynamicsStochasticRandomSeedFriction01[1] 0.031 s
testDynamicsStochasticRandomSeed[2] 0.032 s
testDynamicsStochasticRandomSeedFriction0[2] 0.036 s
testDynamicsStochasticRandomSeedFriction01[2] 0.472 s

ThermodynamicsTest

testThermodynamics[0] 0.054 s
testThermodynamics[1] 0.027 s
testThermodynamics[2] 0.026 s
testThermodynamics[3] 0.031 s
testThermodynamics[4] 0.031 s
testThermodynamics[5] 0.036 s
testThermodynamics[6] 0.032 s
testThermodynamics[7] 0.035 s
testThermodynamics[8] 0.189 s
testThermodynamics[9] 0.027 s
testThermodynamics[10] 0.030 s
testThermodynamics[11] 0.032 s
testThermodynamics[12] 0.196 s
testThermodynamics[13] 0.036 s
testThermodynamics[14] 0.040 s
testThermodynamics[15] 0.042 s
testThermodynamics[16] 0.074 s
testThermodynamics[17] 0.034 s
testThermodynamics[18] 0.037 s
testThermodynamics[19] 0.037 s
testThermodynamics[20] 0.037 s

PhRepexTest

testPhRepexExchangeValidity 1.564 s
testPhRepexRestarts 1.358 s

MinimizeTest

testMinimizeIterations 0.604 s
testMinimizeConvergenceCriteria 0.905 s
testMinimizeHelp 0.043 s

BARSingleTopologyTest

testBARHelp 0.046 s

MinimizeCrystalsTest

testCrystalMinFractional 0.863 s
testCrystalMinHelp 0.042 s
testCrystalMinCoords 0.318 s
testCrystalMinConvergenceCriteria 0.904 s
testCrystalMinIterations 0.764 s

BARFilesTest

testBARHelp 0.031 s

GenZTest

testGenZHelp 0.046 s
testGenZ 0.041 s

DynamicsRESPANVETest

testRESPANVE[0] 2.348 s

DynamicsOpenMMRESPANVETest

testDynamicsOpenMMRESPANVE[0] 0.017 s

SuperposeCrystalsTest

testBaseSingleMTSuperposeCrystals2 0.148 s
testBaseSingleSuperposeCrystalsHandedness 0.099 s
testBaseAverageSuperposeCrystalsHydrogen 0.085 s
testAutoSymGeneration 0.609 s
testBaseSingleMTSuperposeCrystals 0.540 s
testBaseSingleSuperposeCrystalsHydrogen 0.113 s
testSuperposeCrystalsLongMolecule 0.142 s
testBaseAverageSuperposeCrystalsAlchemicalAtoms 0.163 s
testBaseSingleAUSuperposeCrystals 0.078 s
testBaseSingleSuperposeCrystalsZPrime2 0.105 s
testBaseAverageSuperposeCrystalsHandedness 0.072 s
testBaseSingleSuperposeCrystalsSohnckeGroup 0.078 s
testBaseAverageSuperposeCrystalsSohnckeGroup 0.062 s
testBaseAverageSuperposeCrystals 0.077 s
testBaseSingleSuperposeCrystalsSmallProtein 0.169 s
testBaseAverageSuperposeCrystalsSmallProtein 0.158 s
testBaseAverageSuperposeCrystalsZPrime2 0.094 s
testBaseAverageSuperposeCrystalsPrintSym 0.092 s
testSuperposeCrystalsHelp 0.034 s
testBaseSingleSuperposeCrystals 0.081 s

DynamicsBeemanBerendsenTest

testDynamicsBeemanBerendsen[0] 0.456 s

ClusterTest

testClusterHelp 0.036 s
testBaseCluster 0.100 s

DynamicsInitVelocitiesTest

testDynamicsInitVelocities[0] 0.896 s

OSTGradientTest

testOSTGradient[0] 1.409 s
testMetaDynamicsGradient[0] 1.149 s
testOSTBiasHelp[0] 0.061 s

DynamicsNVTTest

testDynamicsNVT[0] 15.39 s

RotamerOptimizationTest

testSelfEnergyElimination[0] 2.620 s
testPairEnergyElimination[0] 1.322 s
testSelfEnergyElimination[1] 0.752 s
testPairEnergyElimination[1] 0.843 s
testSelfEnergyElimination[2] 0.711 s
testPairEnergyElimination[2] 0.818 s
testSelfEnergyElimination[3] 1.010 s
testPairEnergyElimination[3] 1.035 s
testSelfEnergyElimination[4] 0.888 s
testPairEnergyElimination[4] 0.814 s
testSelfEnergyElimination[5] 0.721 s
testPairEnergyElimination[5] 0.691 s
testSelfEnergyElimination[6] 0.816 s
testPairEnergyElimination[6] 0.680 s
testSelfEnergyElimination[7] 0.961 s
testPairEnergyElimination[7] 0.928 s

DynamicsOpenMMStochasticTest

testDynamicsOpenMMStochastic[0] 0.026 s

CIFFilterTest

testCIFFilter2DRM 0.352 s
testCIFFilter3DYC 0.933 s

CrystalReciprocalSpaceTest

test1NSFPermanent 1.950 s
test1N7SPermanent 2.177 s

FormFactorTest

testCarbonfrho 0.020 s
testCarbonFF 0.026 s
testFormFactors3G 0.040 s
testFormFactors 0.039 s

XRayMinimizeTest

testSplineFCTOESQ[0] 3.853 s
testSplineFOTOESQ[0] 3.274 s
testSplineF1F2[0] 3.496 s
testSplineFOFC[0] 3.331 s
testScaleBulk[0] 3.275 s
testSigmaA[0] 4.030 s
testCrystalStats[0] 3.237 s
testSplineFCTOESQ[1] 5.309 s
testSplineFOTOESQ[1] 5.539 s
testSplineF1F2[1] 5.505 s
testSplineFOFC[1] 5.215 s
testScaleBulk[1] 5.295 s
testSigmaA[1] 6.455 s
testCrystalStats[1] 5.191 s

RealspaceManyBodyTest

testManyBodyHelp 0.357 s

XRayGradientTest

test1N7SBFactorsGradient 18.12 s
test1N7SXYZGradient 20.23 s
testAlametXYZGradient 12.34 s
testGradientHelp 0.038 s

MTZFilterTest

testMTZParams 1.021 s
testMTZReflectionList 0.092 s
testMTZReadFile 0.580 s
testMTZHKL 0.564 s

XRayManyBodyTest

testManyBodyGlobal 20.45 s
testManyBodyHelp 0.046 s