Uses of Class
ffx.potential.parsers.SystemFilter

Packages that use SystemFilter

Package	Description
ffx.potential.parsers	The Parsers package handles reading/writing files to/from the internal data structure.
ffx.potential.utils	The Utils package implements core functionality needed for using the Potential package, such as opening and closing structure files, basic force field energy evaluations, etc.
ffx.ui	The UI package provides views and controllers for manipulating molecular systems.
ffx.ui.commands	The Commands package implements a Client/Server interface between Force Field X and simulations.

Uses of SystemFilter in ffx.potential.parsers

Subclasses of SystemFilter in ffx.potential.parsers

Modifier and Type	Class	Description
class	CIFFilter	The CIFFilter class parses CIF coordinate (*.CIF) files.
class	INTFilter	The INTFilter class parses TINKER internal coordinate (*.INT) files.
class	MergeFilter	The MergeFilter class allows Force Field X to treat merging of Systems just like opening a file from a hard disk or socket.
final class	PDBFilter	The PDBFilter class parses data from a Protein DataBank (*.PDB) file.
class	XPHFilter	The XYZFilter class parses TINKER Cartesian coordinate (*.XYZ) files.
class	XYZFilter	The XYZFilter class parses TINKER Cartesian coordinate (*.XYZ) files.

Constructors in ffx.potential.parsers with parameters of type SystemFilter

Modifier	Constructor	Description
	XPHFilter(SystemFilter systemFilter, ExtendedSystem esvSystem)

Uses of SystemFilter in ffx.potential.utils

Methods in ffx.potential.utils that return SystemFilter

Modifier and Type	Method	Description
SystemFilter	PotentialsFileOpener.getFilter()	Getter for the field filter.
SystemFilter	PotentialsFunctions.getFilter()	Returns the last SystemFilter created by this (can be null).
SystemFilter	PotentialsUtils.getFilter()	Returns the last SystemFilter created by this (can be null).

Constructors in ffx.potential.utils with parameters of type SystemFilter

Modifier	Constructor	Description
	ProgressiveAlignmentOfCrystals(SystemFilter baseFilter, SystemFilter targetFilter, boolean isSymmetric)	Constructor for the ProgressiveAlignmentOfCrystals class.
	Superpose(SystemFilter baseFilter, SystemFilter targetFilter, boolean isSymmetric)

Uses of SystemFilter in ffx.ui

Methods in ffx.ui that return SystemFilter

Modifier and Type	Method	Description
SystemFilter	MainPanel.getFilter()	Return the active SystemFilter.
SystemFilter	UIUtils.getFilter()

Uses of SystemFilter in ffx.ui.commands

Subclasses of SystemFilter in ffx.ui.commands

Modifier and Type	Class	Description
final class	SimulationFilter	The SimulationFilter class parses system data sent by FFXServer to FFXClient.