Package ffx.xray.parsers

Class CNSFilter

java.lang.Object
ffx.xray.parsers.CNSFilter
All Implemented Interfaces:
DiffractionFileFilter
public class CNSFilter extends Object implements DiffractionFileFilter
CNSFilter class.
Since:
1.0
Author:
Timothy D. Fenn

  • Constructor Details

    • CNSFilter

      public CNSFilter()
      Constructor for CNSFilter.

  • Method Details

    • getReflectionList

      public ReflectionList getReflectionList(File cnsFile)
      Get reflection information from a reflection file.
      Specified by:
      getReflectionList in interface DiffractionFileFilter
      Parameters:
      cnsFile - File to read in.
      Returns:
      The ReflectionList, or null if not enough information present in the reflection file.

    • getReflectionList

      public ReflectionList getReflectionList(File cnsFile, org.apache.commons.configuration2.CompositeConfiguration properties)
      Get reflection information from a reflection file.
      Specified by:
      getReflectionList in interface DiffractionFileFilter
      Parameters:
      cnsFile - File to read in.
      properties - System properties.
      Returns:
      The ReflectionList, or null if not enough information present in the reflection file.

    • getResolution

      public double getResolution(File cnsFile, Crystal crystal)
      Attempt to determine resolution of reflection file.
      Specified by:
      getResolution in interface DiffractionFileFilter
      Parameters:
      cnsFile - File to read in.
      crystal - Crystal system to determine resolution information from.
      Returns:
      The resolution.

    • readFile

      public boolean readFile(File cnsFile, ReflectionList reflectionList, DiffractionRefinementData refinementData, org.apache.commons.configuration2.CompositeConfiguration properties)
      Read in reflection file.
      Specified by:
      readFile in interface DiffractionFileFilter
      Parameters:
      cnsFile - File to read in.
      reflectionList - The ReflectionList to find data indices.
      refinementData - The DiffractionRefinementData object to fill in.
      properties - System properties.
      Returns:
      True if read in properly.