Package ffx.xray.commands
Class AverageMTZ
java.lang.Object
ffx.utilities.FFXCommand
ffx.algorithms.cli.AlgorithmsCommand
ffx.xray.commands.AverageMTZ
Use AverageMTZ to provide two MTZ files and an iteration for a cumulative moving average.
Usage:
ffxc xray.AverageMTZ <filename1> <filename2>
Usage:
ffxc xray.AverageMTZ <filename1> <filename2>
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Field Summary
Fields inherited from class ffx.algorithms.cli.AlgorithmsCommand
activeAssembly, algorithmFunctions, algorithmListener, baseDir
Fields inherited from class ffx.utilities.FFXCommand
args, binding, color, help, logger, parseResult, version
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Constructor Summary
ConstructorsConstructorDescriptionAverageMTZ constructor.AverageMTZ
(FFXBinding binding) AverageMTZ constructor.AverageMTZ
(String[] args) AverageMTZ constructor that sets the command line arguments. -
Method Summary
Modifier and TypeMethodDescriptionReturns a List of all Potential objects associated with this script.run()
Execute this Command.Methods inherited from class ffx.algorithms.cli.AlgorithmsCommand
destroyPotentials, getActiveAssemblies, getActiveAssembly, init, saveDirFile, setActiveAssembly, setBaseDir, updateTitle
Methods inherited from class ffx.utilities.FFXCommand
getCommand, helpString, listCommands, setBinding
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Constructor Details
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AverageMTZ
public AverageMTZ()AverageMTZ constructor. -
AverageMTZ
AverageMTZ constructor that sets the command line arguments.- Parameters:
args
- Command line arguments.
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AverageMTZ
AverageMTZ constructor.- Parameters:
binding
- The Binding to use.
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Method Details
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run
Description copied from class:FFXCommand
Execute this Command.- Overrides:
run
in classFFXCommand
- Returns:
- The current FFXCommand.
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getPotentials
Description copied from class:AlgorithmsCommand
Returns a List of all Potential objects associated with this script.- Overrides:
getPotentials
in classAlgorithmsCommand
- Returns:
- All Potentials. Sometimes empty, never null.
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