Uses of Package
ffx.potential.parsers

Packages that use ffx.potential.parsers

Package	Description
ffx.potential.bonded	The Bonded package implements bonded molecular mechanics terms such as bonds, angles, torsions, etc.
ffx.potential.parsers	The Parsers package handles reading/writing files to/from the internal data structure.
ffx.potential.utils	The Utils package implements core functionality needed for using the Potential package, such as opening and closing structure files, basic force field energy evaluations, etc.
ffx.ui	The UI package provides views and controllers for manipulating molecular systems.
ffx.ui.commands	The Commands package implements a Client/Server interface between Force Field X and simulations.

Classes in ffx.potential.parsers used by ffx.potential.bonded

Class	Description
PDBFilter.PDBFileStandard	Presently, VERSION3_3 is default, and VERSION3_2 is anything non-standard.

Classes in ffx.potential.parsers used by ffx.potential.parsers

Class	Description
PDBFilter.Mutation
PDBFilter.PDBFileStandard	Presently, VERSION3_3 is default, and VERSION3_2 is anything non-standard.
SystemFilter	The SystemFilter class is the base class for most Force Field X file parsers.
SystemFilter.Versioning

Classes in ffx.potential.parsers used by ffx.potential.utils

Class	Description
FileOpener	The FileOpener interface specifies Runnable objects which can return one or more MolecularAssemblies.
PDBFilter.Mutation
SystemFilter	The SystemFilter class is the base class for most Force Field X file parsers.

Classes in ffx.potential.parsers used by ffx.ui

Class	Description
FileOpener	The FileOpener interface specifies Runnable objects which can return one or more MolecularAssemblies.
PDBFilter.Mutation
SystemFilter	The SystemFilter class is the base class for most Force Field X file parsers.

Classes in ffx.potential.parsers used by ffx.ui.commands

Class	Description
SystemFilter	The SystemFilter class is the base class for most Force Field X file parsers.