Uses of Enum Class
ffx.potential.parsers.PDBFilter.PDBFileStandard
Packages that use PDBFilter.PDBFileStandard
Package
Description
The Bonded package implements bonded molecular mechanics terms such as bonds, angles, torsions,
etc.
The Parsers package handles reading/writing files to/from the internal data structure.
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Uses of PDBFilter.PDBFileStandard in ffx.potential.bonded
Methods in ffx.potential.bonded with parameters of type PDBFilter.PDBFileStandardModifier and TypeMethodDescriptionPolymerUtils.assignAtomTypes(MolecularAssembly molecularAssembly, PDBFilter.PDBFileStandard fileStandard) Assign force field atoms types to common chemistries using "biotype" records.static voidNamingUtils.checkHydrogenAtomNames(Residue residue, PDBFilter.PDBFileStandard fileStandard) Ensures proper naming of hydrogen according to latest PDB format. -
Uses of PDBFilter.PDBFileStandard in ffx.potential.parsers
Methods in ffx.potential.parsers that return PDBFilter.PDBFileStandardModifier and TypeMethodDescriptionstatic PDBFilter.PDBFileStandardReturns the enum constant of this class with the specified name.static PDBFilter.PDBFileStandard[]PDBFilter.PDBFileStandard.values()Returns an array containing the constants of this enum class, in the order they are declared.