Uses of Class
ffx.potential.bonded.ResidueState

Packages that use ResidueState

Package	Description
ffx.potential.bonded	The Bonded package implements bonded molecular mechanics terms such as bonds, angles, torsions, etc.

Uses of ResidueState in ffx.potential.bonded

Fields in ffx.potential.bonded declared as ResidueState

Modifier and Type	Field	Description
ResidueState	Rotamer.originalState	Residue state used to initialize the rotamer.

Methods in ffx.potential.bonded that return ResidueState

Modifier and Type	Method	Description
static ResidueState[]	ResidueState.storeAllCoordinates(Residue[] residues)	storeAllCoordinates.
static ResidueState[]	ResidueState.storeAllCoordinates(List<Residue> residueList)	storeAllCoordinates.
ResidueState	MultiResidue.storeState()	storeState.
ResidueState	Residue.storeState()	storeState.

Methods in ffx.potential.bonded with parameters of type ResidueState

Modifier and Type	Method	Description
double	ResidueState.compareTo(ResidueState residueState)
static void	ResidueState.revertAllCoordinates(List<Residue> residueList, ResidueState[] states)	revertAllCoordinates.
void	MultiResidue.revertState(ResidueState state)
void	Residue.revertState(ResidueState state)	revertState.

Constructors in ffx.potential.bonded with parameters of type ResidueState

Modifier	Constructor	Description
	Rotamer(AminoAcidUtils.AminoAcid3 aminoAcid3, ResidueState residueState, double... values)	Constructor for Rotamer.
	Rotamer(AminoAcidUtils.AminoAcid3 aminoAcid3, ResidueState residueState, TitrationUtils titrationUtils, double... values)	Constructor for Rotamer.
	Rotamer(NucleicAcidUtils.NucleicAcid3 nucleicAcid3, ResidueState residueState, double... values)	Constructor for Rotamer.
	Rotamer(NucleicAcidUtils.NucleicAcid3 nucleicAcid3, ResidueState residueState, TitrationUtils titrationUtils, double... values)	Constructor for Rotamer.
	Rotamer(ResidueState residueState, double... values)	Constructor for unknown residue types.
	Rotamer(ResidueState residueState, TitrationUtils titrationUtils, double... values)	Constructor for unknown residue types.