Package ffx.potential.bonded

Enum Class AminoAcidUtils.AminoAcid3

java.lang.Object

java.lang.Enum<AminoAcidUtils.AminoAcid3>

ffx.potential.bonded.AminoAcidUtils.AminoAcid3

All Implemented Interfaces:

Serializable, Comparable<AminoAcidUtils.AminoAcid3>, Constable

Enclosing class:

AminoAcidUtils

public static enum AminoAcidUtils.AminoAcid3
extends Enum<AminoAcidUtils.AminoAcid3>

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Enum

Enum.EnumDesc<E extends Enum<E>>

Enum Constant Summary

Enum Constants

Enum Constant	Description
ACE
AIB
ALA
ARG
ASD
ASH
ASN
ASP
COH
CYD
CYS
CYX
FOR
GLD
GLH
GLN
GLU
GLY
H2N
HID
HIE
HIS
ILE
LEU
LYD
LYS
MET
NH2
NME
ORN
PCA
PHE
PRO
SER
THR
TRP
TYD
TYR
UNK
VAL

Field Summary

Fields

Modifier and Type	Field	Description
final int	heavyAtoms
final boolean	isConstantPhTautomer
final boolean	isConstantPhTitratable
final boolean	nonStandardProtonation
final boolean	useWithMultiResidue

Method Summary

Modifier and Type	Method	Description
static AminoAcidUtils.AminoAcid3	valueOf(String name)	Returns the enum constant of this class with the specified name.
static AminoAcidUtils.AminoAcid3[]	values()	Returns an array containing the constants of this enum class, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, describeConstable, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Details

GLY

public static final AminoAcidUtils.AminoAcid3 GLY

ALA

public static final AminoAcidUtils.AminoAcid3 ALA

VAL

public static final AminoAcidUtils.AminoAcid3 VAL

LEU

public static final AminoAcidUtils.AminoAcid3 LEU

ILE

public static final AminoAcidUtils.AminoAcid3 ILE

SER

public static final AminoAcidUtils.AminoAcid3 SER

THR

public static final AminoAcidUtils.AminoAcid3 THR

CYS

public static final AminoAcidUtils.AminoAcid3 CYS

CYX

public static final AminoAcidUtils.AminoAcid3 CYX

CYD

public static final AminoAcidUtils.AminoAcid3 CYD

PRO

public static final AminoAcidUtils.AminoAcid3 PRO

PHE

public static final AminoAcidUtils.AminoAcid3 PHE

TYR

public static final AminoAcidUtils.AminoAcid3 TYR

TYD

public static final AminoAcidUtils.AminoAcid3 TYD

TRP

public static final AminoAcidUtils.AminoAcid3 TRP

HIS

public static final AminoAcidUtils.AminoAcid3 HIS

HID

public static final AminoAcidUtils.AminoAcid3 HID

HIE

public static final AminoAcidUtils.AminoAcid3 HIE

ASP

public static final AminoAcidUtils.AminoAcid3 ASP

ASH

public static final AminoAcidUtils.AminoAcid3 ASH

ASD

public static final AminoAcidUtils.AminoAcid3 ASD

ASN

public static final AminoAcidUtils.AminoAcid3 ASN

GLU

public static final AminoAcidUtils.AminoAcid3 GLU

GLH

public static final AminoAcidUtils.AminoAcid3 GLH

GLD

public static final AminoAcidUtils.AminoAcid3 GLD

GLN

public static final AminoAcidUtils.AminoAcid3 GLN

MET

public static final AminoAcidUtils.AminoAcid3 MET

LYS

public static final AminoAcidUtils.AminoAcid3 LYS

LYD

public static final AminoAcidUtils.AminoAcid3 LYD

ARG

public static final AminoAcidUtils.AminoAcid3 ARG

ORN

public static final AminoAcidUtils.AminoAcid3 ORN

AIB

public static final AminoAcidUtils.AminoAcid3 AIB

PCA

public static final AminoAcidUtils.AminoAcid3 PCA

H2N

public static final AminoAcidUtils.AminoAcid3 H2N

FOR

public static final AminoAcidUtils.AminoAcid3 FOR

ACE

public static final AminoAcidUtils.AminoAcid3 ACE

COH

public static final AminoAcidUtils.AminoAcid3 COH

NH2

public static final AminoAcidUtils.AminoAcid3 NH2

NME

public static final AminoAcidUtils.AminoAcid3 NME

UNK

public static final AminoAcidUtils.AminoAcid3 UNK

Field Details

heavyAtoms

public final int heavyAtoms

useWithMultiResidue

public final boolean useWithMultiResidue

isConstantPhTitratable

public final boolean isConstantPhTitratable

isConstantPhTautomer

public final boolean isConstantPhTautomer

nonStandardProtonation

public final boolean nonStandardProtonation

Method Details

values

public static AminoAcidUtils.AminoAcid3[] values()

Returns an array containing the constants of this enum class, in the order they are declared.

Returns:

an array containing the constants of this enum class, in the order they are declared

valueOf

public static AminoAcidUtils.AminoAcid3 valueOf(String name)

Returns the enum constant of this class with the specified name. The string must match exactly an identifier used to declare an enum constant in this class. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum class has no constant with the specified name

NullPointerException - if the argument is null