Package ffx.utilities

@ParametersAreNonnullByDefault package ffx.utilities

The Utilities package implements a variety of useful Directory, File, Port, String, etc functionality.

Since:

1.0

Author:

Michael J. Schnieders

Related Packages

Package	Description
ffx	Force Field X implements fixed charge and polarizable atomic multipole molecular mechanics potentials, local and global optimization, molecular dynamics, free energy differences, etc, with special support for crystal space groups.

Class	Description
ByteSwap	ByteSwap class.
Constants	Library class containing constants such as Avogadro's number.
DirectoryUtils	DirectoryUtils class.
DoubleIndexPair	DoubleIndexPair record.
DoubleXMLAdapter	Convert a Double to a String and vice versa for use with JAXB.
DownloadUtils	Download utilities.
FFXCommand	Base Command class.
FFXContext	This represents the context of an FFX MolecularAssembly.
FFXProperties	The FFXProperty Annotation can be applied multiple times to some classes.
FFXProperty	The FFXProperty Annotation should be used to document fields that are set using property files, keyword files, force field parameter files and the Java property system.
FFXScript	BaseScript class.
FFXTest	The FFXTest configures the context for FFX tests.
FileUtils	FileUtils class.
HistogramXmlAdapter	Write/read Histogram data to/from a String.
Hybrid36	Java port of the hy36encode() and hy36decode() functions in the hybrid_36.py Python prototype/reference implementation.
IndexIndexPair	The IndexIndexPair record.
Keyword	The Keyword class holds a single Force Field X keyword entry.
ObjectPair<T,S extends Comparable<S>>	ObjectPair record.
PortUtils	Port Utilities.
PropertyGroup	The Keyword Group for an FFX Keyword.
PropertyProcessor	Log out FFXProperty Annotations for documentation purposes.
Resources	Log resources.
StringOutputStream	StringOutputStream class.
StringUtils	StringUtils class.
TinkerUtils	A collection of Utility methods for compatibility with Tinker.