Package ffx.realspace.commands.test

Class LambdaGradient

java.lang.Object

ffx.utilities.FFXCommand

ffx.algorithms.cli.AlgorithmsCommand

ffx.realspace.commands.test.LambdaGradient

public class LambdaGradient
extends AlgorithmsCommand

The Real Space Annealing script.
Usage:
ffxc realspace.test.LambdaGradient [options] <filename>

Field Summary

Fields inherited from class ffx.algorithms.cli.AlgorithmsCommand

activeAssembly, algorithmFunctions, algorithmListener, baseDir

Fields inherited from class ffx.utilities.FFXCommand

args, binding, color, help, logger, parseResult, version

Constructor Summary

Constructors

Constructor	Description
LambdaGradient()	LambdaGradient constructor.
LambdaGradient(FFXBinding binding)	LambdaGradient constructor.
LambdaGradient(String[] args)	LambdaGradient constructor that sets the command line arguments.

Method Summary

Modifier and Type	Method	Description
List<Potential>	getPotentials()	Returns a List of all Potential objects associated with this script.
LambdaGradient	run()	Execute this Command.

Methods inherited from class ffx.algorithms.cli.AlgorithmsCommand

destroyPotentials, getActiveAssemblies, getActiveAssembly, getPotentialsFromAssemblies, init, saveDirFile, setBaseDir, updateTitle

Methods inherited from class ffx.utilities.FFXCommand

getCommand, helpString, listCommands, setBinding

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

LambdaGradient

public LambdaGradient()

LambdaGradient constructor.

LambdaGradient

public LambdaGradient(String[] args)

LambdaGradient constructor that sets the command line arguments.

Parameters:

args - Command line arguments.

LambdaGradient

public LambdaGradient(FFXBinding binding)

LambdaGradient constructor.

Parameters:

binding - The Binding to use.

Method Details

run

public LambdaGradient run()

Description copied from class: FFXCommand

Execute this Command.

Overrides:

run in class FFXCommand

Returns:

The current FFXCommand.

getPotentials

public List<Potential> getPotentials()

Description copied from class: AlgorithmsCommand

Returns a List of all Potential objects associated with this script.

Overrides:

getPotentials in class AlgorithmsCommand

Returns:

All Potentials. Sometimes empty, never null.