Uses of Enum Class
ffx.potential.nonbonded.pme.LambdaMode
Packages that use LambdaMode
Package
Description
The Nonbonded package implements nonbonded molecular mechanics terms such as van der Waals and
Particle Mesh Ewald electrostastics.
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Uses of LambdaMode in ffx.potential.nonbonded
Methods in ffx.potential.nonbonded with parameters of type LambdaModeModifier and TypeMethodDescriptionvoid
ScfPredictor.run
(LambdaMode lambdaMode) run.void
ParticleMeshEwald.LambdaFactors.setFactors
(int i, int k, LambdaMode mode) Overriden by the ESV version which updates with every softcore interaction.void
ParticleMeshEwald.LambdaFactorsESV.setFactors
(int i, int k, LambdaMode mode) -
Uses of LambdaMode in ffx.potential.nonbonded.pme
Methods in ffx.potential.nonbonded.pme that return LambdaModeModifier and TypeMethodDescriptionstatic LambdaMode
Returns the enum constant of this class with the specified name.static LambdaMode[]
LambdaMode.values()
Returns an array containing the constants of this enum class, in the order they are declared.Methods in ffx.potential.nonbonded.pme with parameters of type LambdaModeModifier and TypeMethodDescriptionvoid
SCFPredictorParameters.aspcPredictor
(LambdaMode lambdaMode, double[][][] inducedDipole, double[][][] inducedDipoleCR) Always-stable predictor-corrector for the mutual induced dipoles.void
InducedDipoleFieldRegion.init
(Atom[] atoms, Crystal crystal, boolean[] use, int[] molecule, double[] ipdamp, double[] thole, double[][][] coordinates, RealSpaceNeighborParameters realSpaceNeighborParameters, double[][][] inducedDipole, double[][][] inducedDipoleCR, boolean reciprocalSpaceTerm, ReciprocalSpace reciprocalSpace, LambdaMode lambdaMode, EwaldParameters ewaldParameters, AtomicDoubleArray3D field, AtomicDoubleArray3D fieldCR, PMETimings pmeTimings) void
PermanentFieldRegion.init
(Atom[] atoms, Crystal crystal, double[][][] coordinates, double[][][] globalMultipole, double[][][] inducedDipole, double[][][] inducedDipoleCR, int[][][] neighborLists, ScaleParameters scaleParameters, boolean[] use, int[] molecule, double[] ipdamp, double[] thole, int[][] ip11, int[][] mask12, int[][] mask13, int[][] mask14, LambdaMode lambdaMode, boolean reciprocalSpaceTerm, ReciprocalSpace reciprocalSpace, EwaldParameters ewaldParameters, PCGSolver pcgSolver, IntegerSchedule permanentSchedule, RealSpaceNeighborParameters realSpaceNeighborParameters, AtomicDoubleArray3D field, AtomicDoubleArray3D fieldCR) void
RealSpaceEnergyRegion.init
(Atom[] atoms, Crystal crystal, ExtendedSystem extendedSystem, boolean esvTerm, double[][][] coordinates, MultipoleType.MultipoleFrameDefinition[] frame, int[][] axisAtom, double[][][] globalMultipole, double[][][] titrationMultipole, double[][][] tautomerMultipole, double[][][] inducedDipole, double[][][] inducedDipoleCR, boolean[] use, int[] molecule, int[][] ip11, int[][] mask12, int[][] mask13, int[][] mask14, int[][] mask15, boolean[] isSoft, double[] ipdamp, double[] thole, RealSpaceNeighborParameters realSpaceNeighborParameters, boolean gradient, boolean lambdaTerm, boolean nnTerm, LambdaMode lambdaMode, Polarization polarization, EwaldParameters ewaldParameters, ScaleParameters scaleParameters, AlchemicalParameters alchemicalParameters, long[] realSpaceEnergyTime, AtomicDoubleArray3D grad, AtomicDoubleArray3D torque, AtomicDoubleArray3D lambdaGrad, AtomicDoubleArray3D lambdaTorque, SharedDouble shareddEdLambda, SharedDouble sharedd2EdLambda2) void
SCFPredictorParameters.leastSquaresPredictor
(LambdaMode lambdaMode, double[][][] inducedDipole, double[][][] inducedDipoleCR) The least-squares predictor with induced dipole information from 8-10 previous steps reduces the number SCF iterations by ~50%.void
SCFPredictorParameters.polynomialPredictor
(LambdaMode lambdaMode, double[][][] inducedDipole, double[][][] inducedDipoleCR) Polynomial predictor for the mutual induced dipoles.void
SCFPredictorParameters.saveMutualInducedDipoles
(LambdaMode lambdaMode, double[][][] inducedDipole, double[][][] inducedDipoleCR, double[][] directDipole, double[][] directDipoleCR) Save the current converged mutual induced dipoles.