Uses of Class
ffx.potential.bonded.RestrainPosition

Packages that use RestrainPosition

Package	Description
ffx.potential.bonded	The Bonded package implements bonded molecular mechanics terms such as bonds, angles, torsions, etc.
ffx.potential.terms	The terms package contains analytical potential energy terms and their gradients for bonded interactions (bond, angle, stretch-bend, torsions, impropers, Urey-Bradley) and restraint terms used by Force Field X.

Uses of RestrainPosition in ffx.potential.bonded

Methods in ffx.potential.bonded that return RestrainPosition

Modifier and Type	Method	Description
static RestrainPosition	RestrainPosition.parseRestrainPosition(String line, Atom[] atoms, boolean useLambda)	Parse a Restrain-Position line and return a RestrainPosition instance.
static RestrainPosition[]	RestrainPosition.parseRestrainPositions(MolecularAssembly molecularAssembly)

Uses of RestrainPosition in ffx.potential.terms

Methods in ffx.potential.terms that return RestrainPosition

Modifier and Type	Method	Description
RestrainPosition	RestrainPositionPotentialEnergy.getRestrainPosition(int index)	Get the RestrainPosition at a given index.
RestrainPosition[]	RestrainPositionPotentialEnergy.getRestrainPositionArray()	Get an array of RestrainPositions in this term.

Methods in ffx.potential.terms that return types with arguments of type RestrainPosition

Modifier and Type	Method	Description
List<RestrainPosition>	RestrainPositionPotentialEnergy.getRestrainPositions()	Get an unmodifiable view of the RestrainPositions in this term.

Methods in ffx.potential.terms with parameters of type RestrainPosition

Modifier and Type	Method	Description
boolean	RestrainPositionPotentialEnergy.addRestrainPosition(RestrainPosition restrainPosition)	Add a RestrainPosition to this term.
boolean	RestrainPositionPotentialEnergy.addRestrainPositions(RestrainPosition[] restrainPositions)	Add an array of RestrainPositions to this term.
boolean	RestrainPositionPotentialEnergy.removeRestrainPosition(RestrainPosition restrainPosition)	Remove a RestrainPosition from this term.

Method parameters in ffx.potential.terms with type arguments of type RestrainPosition

Modifier and Type	Method	Description
boolean	RestrainPositionPotentialEnergy.addRestrainPositions(List<RestrainPosition> restrainPositions)	Add a list of RestrainPositions to this term.

Constructor parameters in ffx.potential.terms with type arguments of type RestrainPosition

Modifier	Constructor	Description
	RestrainPositionPotentialEnergy(String name, int forceGroup, List<RestrainPosition> restrainPositions)	Create a RestrainPositionPotentialEnergy initialized with a list of terms and force group.
	RestrainPositionPotentialEnergy(String name, Collection<RestrainPosition> restrainPositions)	Create a RestrainPositionPotentialEnergy initialized with a collection of terms.