Uses of Class
ffx.openmm.Context

Packages that use Context

Package	Description
ffx.openmm	The OpenMM package includes Java classes that are analogues of the OpenMM C++ API.
ffx.openmm.amoeba	The AMOEBA package includes Java classes that are analogues of the OpenMM C++ API for the AMOEBA model.
ffx.openmm.drude	The Drude package includes Java classes that are analogues of the OpenMM C++ API for the Charmm Drude model.
ffx.potential.openmm	The openmm package contains utilities to construct and run Force Field X potentials on the OpenMM platform, including system builders, custom forces, alchemical fixed-charge forces, and integrators tailored to FFX simulations.

Uses of Context in ffx.openmm

Methods in ffx.openmm with parameters of type Context

Modifier and Type	Method	Description
double	MonteCarloBarostat.computeCurrentPressure(Context context)	Compute the instantaneous pressure of a system to which this barostat is applied.
void	MonteCarloFlexibleBarostat.computeCurrentPressure(Context context, com.sun.jna.ptr.PointerByReference pressure)	Compute the current pressure in the system.
void	CustomCVForce.getCollectiveVariableValues(Context context, com.sun.jna.ptr.PointerByReference values)	Get the values of all collective variables in a given context.
com.sun.jna.ptr.PointerByReference	CustomCVForce.getInnerContext(Context context)	Get the inner context used for evaluating collective variables.
void	ATMForce.getPerturbationEnergy(Context context, com.sun.jna.ptr.DoubleByReference u0, com.sun.jna.ptr.DoubleByReference u1, com.sun.jna.ptr.DoubleByReference energy)	Returns the current perturbation energy.
void	ATMForce.getPerturbationEnergy(Context context, DoubleBuffer u0, DoubleBuffer u1, DoubleBuffer energy)	Returns the current perturbation energy.
String	Platform.getPropertyValue(Context context, String property)	Get the value of a context-specific platform property.
void	Platform.setPropertyValue(Context context, String property, String value)	Set the value of a context-specific platform property.
void	ATMForce.updateParametersInContext(Context context)	Update the per-particle parameters in a Context to match those stored in this Force object.
void	CMAPTorsionForce.updateParametersInContext(Context context)	Update the map and torsion parameters in a Context to match those stored in this Force object.
void	CustomAngleForce.updateParametersInContext(Context context)	Update the parameters in the OpenMM Context.
void	CustomBondForce.updateParametersInContext(Context context)	Update the parameters in the OpenMM Context.
void	CustomCentroidBondForce.updateParametersInContext(Context context)	Update the per-bond parameters and tabulated functions in a Context to match those stored in this Force object.
void	CustomCompoundBondForce.updateParametersInContext(Context context)	Update the parameters in the context.
void	CustomCVForce.updateParametersInContext(Context context)	Update the parameters in a Context to match those stored in this Force object.
void	CustomExternalForce.updateParametersInContext(Context context)	Update the parameters in the context.
void	CustomGBForce.updateParametersInContext(Context context)	Update the parameters in the context.
void	CustomHbondForce.updateParametersInContext(Context context)	Update the parameters in a Context to match those stored in this Force object.
void	CustomManyParticleForce.updateParametersInContext(Context context)	Update the per-particle parameters and tabulated functions in a Context to match those stored in this Force object.
void	CustomNonbondedForce.updateParametersInContext(Context context)	Update the per-particle parameters and tabulated functions in a Context to match those stored in this Force object.
void	CustomTorsionForce.updateParametersInContext(Context context)	Update the per-torsion parameters in a Context to match those stored in this Force object.
void	GayBerneForce.updateParametersInContext(Context context)	Update the parameters in a Context to match those stored in this Force object.
void	GBSAOBCForce.updateParametersInContext(Context context)	Update the particle parameters in a Context to match those stored in this Force object.
void	HarmonicAngleForce.updateParametersInContext(Context context)	Update the parameters in the OpenMM Context.
void	HarmonicBondForce.updateParametersInContext(Context context)	Update the parameters in the OpenMM Context.
void	NonbondedForce.updateParametersInContext(Context context)	Update the parameters in the context.
void	PeriodicTorsionForce.updateParametersInContext(Context context)	Update the parameters in the OpenMM Context.
void	RBTorsionForce.updateParametersInContext(Context context)	Update the parameters in the OpenMM Context.
void	RMSDForce.updateParametersInContext(Context context)	Update the reference positions and particle indices in a Context to match those stored in this Force object.

Uses of Context in ffx.openmm.amoeba

Methods in ffx.openmm.amoeba with parameters of type Context

Modifier and Type	Method	Description
void	HippoNonbondedForce.getDPMEParametersInContext(Context context, com.sun.jna.ptr.DoubleByReference alpha, com.sun.jna.ptr.IntByReference nx, com.sun.jna.ptr.IntByReference ny, com.sun.jna.ptr.IntByReference nz)	Get the DPME parameters in context.
void	HippoNonbondedForce.getDPMEParametersInContext(Context context, DoubleBuffer alpha, IntBuffer nx, IntBuffer ny, IntBuffer nz)	Get the DPME parameters in context.
DoubleArray	MultipoleForce.getElectrostaticPotential(Context context, DoubleArray points)	Get the electrostatic potential at specified points.
void	HippoNonbondedForce.getInducedDipoles(Context context, com.sun.jna.ptr.PointerByReference dipoles)	Get the induced dipoles.
void	MultipoleForce.getInducedDipoles(Context context, DoubleArray inducedDipoles)	Get the induced dipoles.
void	HippoNonbondedForce.getLabFramePermanentDipoles(Context context, com.sun.jna.ptr.PointerByReference dipoles)	Get the lab frame permanent dipoles.
void	MultipoleForce.getLabFramePermanentDipoles(Context context, DoubleArray dipoles)	Get the lab frame permanent dipoles.
void	HippoNonbondedForce.getPMEParametersInContext(Context context, com.sun.jna.ptr.DoubleByReference alpha, com.sun.jna.ptr.IntByReference nx, com.sun.jna.ptr.IntByReference ny, com.sun.jna.ptr.IntByReference nz)	Get the PME parameters in context.
void	HippoNonbondedForce.getPMEParametersInContext(Context context, DoubleBuffer alpha, IntBuffer nx, IntBuffer ny, IntBuffer nz)	Get the PME parameters in context.
void	MultipoleForce.getPMEParametersInContext(Context context, com.sun.jna.ptr.DoubleByReference alpha, com.sun.jna.ptr.IntByReference nx, com.sun.jna.ptr.IntByReference ny, com.sun.jna.ptr.IntByReference nz)	Get the PME parameters in the context.
void	MultipoleForce.getSystemMultipoleMoments(Context context, DoubleArray moments)	Get the system multipole moments.
void	MultipoleForce.getTotalDipoles(Context context, DoubleArray dipoles)	Get the total dipoles.
void	GeneralizedKirkwoodForce.updateParametersInContext(Context context)	Update the parameters in the context.
void	GKCavitationForce.updateParametersInContext(Context context)	Update the parameters in the context.
void	HippoNonbondedForce.updateParametersInContext(Context context)	Update the parameters in a Context to match those stored in this Force object.
void	MultipoleForce.updateParametersInContext(Context context)	Update the parameters in the context.
void	VdwForce.updateParametersInContext(Context context)	Update the per-particle parameters in a Context to match those stored in this Force object.
void	WcaDispersionForce.updateParametersInContext(Context context)	Update the per-particle parameters in a Context to match those stored in this Force object.

Uses of Context in ffx.openmm.drude

Methods in ffx.openmm.drude with parameters of type Context

Modifier and Type	Method	Description
void	DrudeForce.updateParametersInContext(Context context)	Update the particle and screened pair parameters in a Context to match those stored in this Force object.

Uses of Context in ffx.potential.openmm

Subclasses of Context in ffx.potential.openmm

Modifier and Type	Class	Description
class	OpenMMContext	Creates and manage an OpenMM Context.