Uses of Class
ffx.algorithms.thermodynamics.RepExOST
Packages that use RepExOST
Package
Description
The Thermodynamics package computes free energy differences using Orthogonal Space Tempering
(OST) sampling via pure Java or OpenMM (via Monte Carlo OST).
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Uses of RepExOST in ffx.algorithms.thermodynamics
Methods in ffx.algorithms.thermodynamics that return RepExOSTModifier and TypeMethodDescriptionstatic RepExOST
RepExOST.repexMC
(OrthogonalSpaceTempering orthogonalSpaceTempering, MonteCarloOST monteCarloOST, DynamicsOptions dynamicsOptions, OSTOptions ostOptions, org.apache.commons.configuration2.CompositeConfiguration compositeConfiguration, String fileType, boolean twoStep, double repexInterval) Construct a RepExOST for Monte Carlo orthogonal space tempering.static RepExOST
RepExOST.repexMD
(OrthogonalSpaceTempering orthogonalSpaceTempering, MolecularDynamics molecularDynamics, DynamicsOptions dynamicsOptions, OSTOptions ostOptions, org.apache.commons.configuration2.CompositeConfiguration compositeConfiguration, String fileType, double repexInterval) Construct a RepExOST for Molecular Dynamics orthogonal space tempering.