Uses of Interface
ffx.algorithms.mc.MCMove

Packages that use MCMove

Package	Description
ffx.algorithms.mc	The MC package implements a variety of Monte Carlo moves for optimization and simulation algorithms.
ffx.algorithms.optimize.manybody	The manybody package implements many-body rotamer optimization infrastructure, including distance matrices, an energy expansion (self, two-body, three-body, and four-body), Dead-end elimination criteria, Goldstein elimination criteria, and supporting data structures for efficient optimization.

Uses of MCMove in ffx.algorithms.mc

Classes in ffx.algorithms.mc that implement MCMove

Modifier and Type	Class	Description
class	LambdaMove	Define an MC move to update lambda.
class	MDMove	Use MD as a coordinate based MC move.
class	RosenbluthChi0Move	Represents a random chi[0] spin of the target residue.
class	RosenbluthChiAllMove	Represents a Boltzmann-drawn spin of all residue torsions for use with RosenbluthCBMC (Configurational-Bias Monte Carlo).

Methods in ffx.algorithms.mc with parameters of type MCMove

Modifier and Type	Method	Description
boolean	BoltzmannMC.mcStep(MCMove move)	Calculates the current system energy and performs an MCMove.
boolean	BoltzmannMC.mcStep(MCMove move, double en1)	Performs an MCMove.
boolean	MetropolisMC.mcStep(MCMove move)	Calculates the current system energy and performs an MCMove.
boolean	MetropolisMC.mcStep(MCMove move, double en1)	Performs an MCMove.

Method parameters in ffx.algorithms.mc with type arguments of type MCMove

Modifier and Type	Method	Description
boolean	BoltzmannMC.mcStep(List<MCMove> moves)	Calculates the current system energy and performs a series of moves sequentially as a single hybrid step.
boolean	BoltzmannMC.mcStep(List<MCMove> moves, double en1)	Performs a series of moves sequentially, as a single hybrid step.
boolean	MetropolisMC.mcStep(List<MCMove> moves)	Calculates the current system energy and performs a series of moves sequentially as a single hybrid step.
boolean	MetropolisMC.mcStep(List<MCMove> moves, double en1)	Performs a series of moves sequentially, as a single hybrid step.

Uses of MCMove in ffx.algorithms.optimize.manybody

Classes in ffx.algorithms.optimize.manybody that implement MCMove

Modifier and Type	Class	Description
class	RotamerMatrixMove	This implements single-rotamer changes in the framework of the rotamer energy matrices.