Package ffx.algorithms.commands.test
Class SortXPH
java.lang.Object
ffx.utilities.FFXCommand
ffx.algorithms.cli.AlgorithmsCommand
ffx.algorithms.commands.test.SortXPH
The SortXPH command unwinds .ARC files from CpHMD runs.
Usage:
ffxc test.SortXPH [options] <structures1> <structures2>
Usage:
ffxc test.SortXPH [options] <structures1> <structures2>
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Field Summary
Fields inherited from class ffx.algorithms.cli.AlgorithmsCommand
activeAssembly, algorithmFunctions, algorithmListener, baseDir
Fields inherited from class ffx.utilities.FFXCommand
args, binding, color, help, logger, parseResult, version
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Constructor Summary
ConstructorsConstructorDescriptionSortXPH()
SortXPH Constructor.SortXPH
(FFXBinding binding) SortXPH Constructor.SortXPH constructor that sets the command line arguments. -
Method Summary
Modifier and TypeMethodDescriptionrun()
Execute this Command.void
setProperties
(org.apache.commons.configuration2.CompositeConfiguration additionalProps) Sets an optional Configuration with additional properties.Methods inherited from class ffx.algorithms.cli.AlgorithmsCommand
destroyPotentials, getActiveAssemblies, getActiveAssembly, getPotentials, init, saveDirFile, setActiveAssembly, setBaseDir, updateTitle
Methods inherited from class ffx.utilities.FFXCommand
getCommand, helpString, listCommands, setBinding
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Constructor Details
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SortXPH
public SortXPH()SortXPH Constructor. -
SortXPH
SortXPH Constructor.- Parameters:
binding
- The Binding to use.
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SortXPH
SortXPH constructor that sets the command line arguments.- Parameters:
args
- Command line arguments.
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Method Details
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setProperties
public void setProperties(org.apache.commons.configuration2.CompositeConfiguration additionalProps) Sets an optional Configuration with additional properties.- Parameters:
additionalProps
- additional properties
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run
Execute this Command.- Overrides:
run
in classFFXCommand
- Returns:
- The current FFXCommand.
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