1 // ******************************************************************************
2 //
3 // Title: Force Field X.
4 // Description: Force Field X - Software for Molecular Biophysics.
5 // Copyright: Copyright (c) Michael J. Schnieders 2001-2024.
6 //
7 // This file is part of Force Field X.
8 //
9 // Force Field X is free software; you can redistribute it and/or modify it
10 // under the terms of the GNU General Public License version 3 as published by
11 // the Free Software Foundation.
12 //
13 // Force Field X is distributed in the hope that it will be useful, but WITHOUT
14 // ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
15 // FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
16 // details.
17 //
18 // You should have received a copy of the GNU General Public License along with
19 // Force Field X; if not, write to the Free Software Foundation, Inc., 59 Temple
20 // Place, Suite 330, Boston, MA 02111-1307 USA
21 //
22 // Linking this library statically or dynamically with other modules is making a
23 // combined work based on this library. Thus, the terms and conditions of the
24 // GNU General Public License cover the whole combination.
25 //
26 // As a special exception, the copyright holders of this library give you
27 // permission to link this library with independent modules to produce an
28 // executable, regardless of the license terms of these independent modules, and
29 // to copy and distribute the resulting executable under terms of your choice,
30 // provided that you also meet, for each linked independent module, the terms
31 // and conditions of the license of that module. An independent module is a
32 // module which is not derived from or based on this library. If you modify this
33 // library, you may extend this exception to your version of the library, but
34 // you are not obligated to do so. If you do not wish to do so, delete this
35 // exception statement from your version.
36 //
37 // ******************************************************************************
38 package ffx.potential.bonded;
39
40 import ffx.potential.bonded.RendererCache.ColorModel;
41 import ffx.potential.bonded.RendererCache.ViewModel;
42 import java.util.List;
43 import javax.swing.tree.TreeNode;
44 import org.jogamp.java3d.BranchGroup;
45 import org.jogamp.java3d.Canvas3D;
46 import org.jogamp.java3d.J3DGraphics2D;
47 import org.jogamp.java3d.Material;
48 import org.jogamp.java3d.Node;
49 import org.jogamp.vecmath.Color3f;
50
51 /**
52 * The ROLS Interace defines "Recursive Over Length Scales" (ROLS) Methods.
53 *
54 * @author Michael J. Schnieders
55 * @since 1.0
56 */
57 public interface ROLS {
58
59 /** Constant <code>MaxLengthScale=5</code> */
60 int MaxLengthScale = 5;
61
62 /**
63 * drawLabel
64 *
65 * @param graphics a {@link org.jogamp.java3d.Canvas3D} object.
66 * @param g2d a {@link org.jogamp.java3d.J3DGraphics2D} object.
67 * @param node a {@link org.jogamp.java3d.Node} object.
68 */
69 void drawLabel(Canvas3D graphics, J3DGraphics2D g2d, Node node);
70
71 /**
72 * getCenter
73 *
74 * @param w a boolean.
75 * @return an array of double.
76 */
77 double[] getCenter(boolean w);
78
79 /**
80 * getList
81 *
82 * @param c a {@link java.lang.Class} object.
83 * @param nodes a {@link java.util.List} object.
84 * @param <T> Node Type to collect.
85 * @return a {@link java.util.List} object.
86 */
87 <T extends TreeNode> List<T> getList(Class<T> c, List<T> nodes);
88
89 /**
90 * getMSCount
91 *
92 * @param c a {@link java.lang.Class} object.
93 * @param count a long.
94 * @param <T> Node Type to count.
95 * @return a long.
96 */
97 <T extends TreeNode> long getMSCount(Class<T> c, long count);
98
99 /**
100 * getMSNode
101 *
102 * @param c a {@link java.lang.Class} object.
103 * @param <T> Node Type to look for.
104 * @return The node.
105 */
106 <T extends TreeNode> T getMSNode(Class<T> c);
107
108 /**
109 * getMW
110 *
111 * @return a double.
112 */
113 double getMW();
114
115 /**
116 * setColor
117 *
118 * @param colorModel a {@link ffx.potential.bonded.RendererCache.ColorModel} object.
119 * @param color a {@link org.jogamp.vecmath.Color3f} object.
120 * @param mat a {@link org.jogamp.java3d.Material} object.
121 */
122 void setColor(ColorModel colorModel, Color3f color, Material mat);
123
124 /**
125 * setView
126 *
127 * @param viewModel a {@link ffx.potential.bonded.RendererCache.ViewModel} object.
128 * @param newShapes a {@link java.util.List} object.
129 */
130 void setView(ViewModel viewModel, List<BranchGroup> newShapes);
131
132 /** update */
133 void update();
134 }