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1   // ******************************************************************************
2   //
3   // Title:       Force Field X.
4   // Description: Force Field X - Software for Molecular Biophysics.
5   // Copyright:   Copyright (c) Michael J. Schnieders 2001-2024.
6   //
7   // This file is part of Force Field X.
8   //
9   // Force Field X is free software; you can redistribute it and/or modify it
10  // under the terms of the GNU General Public License version 3 as published by
11  // the Free Software Foundation.
12  //
13  // Force Field X is distributed in the hope that it will be useful, but WITHOUT
14  // ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
15  // FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
16  // details.
17  //
18  // You should have received a copy of the GNU General Public License along with
19  // Force Field X; if not, write to the Free Software Foundation, Inc., 59 Temple
20  // Place, Suite 330, Boston, MA 02111-1307 USA
21  //
22  // Linking this library statically or dynamically with other modules is making a
23  // combined work based on this library. Thus, the terms and conditions of the
24  // GNU General Public License cover the whole combination.
25  //
26  // As a special exception, the copyright holders of this library give you
27  // permission to link this library with independent modules to produce an
28  // executable, regardless of the license terms of these independent modules, and
29  // to copy and distribute the resulting executable under terms of your choice,
30  // provided that you also meet, for each linked independent module, the terms
31  // and conditions of the license of that module. An independent module is a
32  // module which is not derived from or based on this library. If you modify this
33  // library, you may extend this exception to your version of the library, but
34  // you are not obligated to do so. If you do not wish to do so, delete this
35  // exception statement from your version.
36  //
37  // ******************************************************************************
38  package ffx.openmm;
39  
40  import static edu.uiowa.jopenmm.OpenMMLibrary.OpenMM_AndersenThermostat_create;
41  import static edu.uiowa.jopenmm.OpenMMLibrary.OpenMM_AndersenThermostat_destroy;
42  import static edu.uiowa.jopenmm.OpenMMLibrary.OpenMM_AndersenThermostat_setDefaultCollisionFrequency;
43  import static edu.uiowa.jopenmm.OpenMMLibrary.OpenMM_AndersenThermostat_setDefaultTemperature;
44  
45  /**
46   * This class uses the Andersen method to maintain constant temperature.
47   */
48  public class AndersenThermostat extends Force {
49  
50    /**
51     * OpenMM AndersenThermostat constructor.
52     *
53     * @param temperature The temperature.
54     * @param frequency   The collision frequency.
55     */
56    public AndersenThermostat(double temperature, double frequency) {
57      pointer = OpenMM_AndersenThermostat_create(temperature, frequency);
58    }
59  
60    /**
61     * Set the default temperature.
62     *
63     * @param temperature The temperature.
64     */
65    public void setDefaultTemperature(double temperature) {
66      OpenMM_AndersenThermostat_setDefaultTemperature(pointer, temperature);
67    }
68  
69    /**
70     * Set the default collision frequency.
71     *
72     * @param frequency The collision frequency.
73     */
74    public void setDefaultCollisionFrequency(double frequency) {
75      OpenMM_AndersenThermostat_setDefaultCollisionFrequency(pointer, frequency);
76    }
77  
78    /**
79     * Destroy the force.
80     */
81    public void destroy() {
82      if (pointer != null) {
83        OpenMM_AndersenThermostat_destroy(pointer);
84        pointer = null;
85      }
86    }
87  }