1 // ****************************************************************************** 2 // 3 // Title: Force Field X. 4 // Description: Force Field X - Software for Molecular Biophysics. 5 // Copyright: Copyright (c) Michael J. Schnieders 2001-2025. 6 // 7 // This file is part of Force Field X. 8 // 9 // Force Field X is free software; you can redistribute it and/or modify it 10 // under the terms of the GNU General Public License version 3 as published by 11 // the Free Software Foundation. 12 // 13 // Force Field X is distributed in the hope that it will be useful, but WITHOUT 14 // ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS 15 // FOR A PARTICULAR PURPOSE. See the GNU General Public License for more 16 // details. 17 // 18 // You should have received a copy of the GNU General Public License along with 19 // Force Field X; if not, write to the Free Software Foundation, Inc., 59 Temple 20 // Place, Suite 330, Boston, MA 02111-1307 USA 21 // 22 // Linking this library statically or dynamically with other modules is making a 23 // combined work based on this library. Thus, the terms and conditions of the 24 // GNU General Public License cover the whole combination. 25 // 26 // As a special exception, the copyright holders of this library give you 27 // permission to link this library with independent modules to produce an 28 // executable, regardless of the license terms of these independent modules, and 29 // to copy and distribute the resulting executable under terms of your choice, 30 // provided that you also meet, for each linked independent module, the terms 31 // and conditions of the license of that module. An independent module is a 32 // module which is not derived from or based on this library. If you modify this 33 // library, you may extend this exception to your version of the library, but 34 // you are not obligated to do so. If you do not wish to do so, delete this 35 // exception statement from your version. 36 // 37 // ****************************************************************************** 38 package ffx.algorithms.optimize.anneal; 39 40 /** 41 * Temperature schedule for simulated annealing 42 * 43 * @author Jacob M. Litman 44 * @author Michael J. Schnieders 45 * @since 1.0 46 */ 47 public interface AnnealingSchedule { 48 49 /** 50 * Gets the starting temperature. 51 * 52 * @return Starting temperature in Kelvin. 53 */ 54 double getHighTemp(); 55 56 /** 57 * Gets the final temperature. 58 * 59 * @return Final temperature in Kelvin. 60 */ 61 double getLowTemp(); 62 63 /** 64 * Gets the number of annealing windows (including repeat windows). 65 * 66 * @return Number of annealing windows. 67 */ 68 int getNumWindows(); 69 70 /** 71 * Get the temperature for annealing step i. 72 * 73 * @param i An annealing step [0-nWindows) 74 * @return Associated temperature. 75 */ 76 double getTemperature(int i); 77 78 /** 79 * Get all temperatures this schedule specifies. 80 * 81 * @return An array of temperatures specified. 82 */ 83 double[] getTemperatures(); 84 85 /** 86 * Returns the longest window to be used (normalized to the number of MD steps in a "regular" 87 * window). 88 * 89 * @return Maximum normalized window length. 90 */ 91 double maxWindowLength(); 92 93 /** 94 * Returns the shortest window to be used (normalized to the number of MD steps in a "regular" 95 * window). 96 * 97 * @return Minimum normalized window length. 98 */ 99 double minWindowLength(); 100 101 /** 102 * Returns the sum of window lengths to be used (normalized to the number of MD steps in a 103 * "regular" window). 104 * 105 * @return Total normalized window length. 106 */ 107 double totalWindowLength(); 108 109 /** 110 * Get the relative size of a window (normalized to the number of MD steps in a "regular" window). 111 * 112 * @param window Window to check. 113 * @return Normalized length of the window. 114 */ 115 double windowLength(int window); 116 }