1 //******************************************************************************
2 //
3 // File: DoubleMatrixBuf.java
4 // Package: edu.rit.mp.buf
5 // Unit: Class edu.rit.mp.buf.DoubleMatrixBuf
6 //
7 // This Java source file is copyright (C) 2009 by Alan Kaminsky. All rights
8 // reserved. For further information, contact the author, Alan Kaminsky, at
9 // ark@cs.rit.edu.
10 //
11 // This Java source file is part of the Parallel Java Library ("PJ"). PJ is free
12 // software; you can redistribute it and/or modify it under the terms of the GNU
13 // General Public License as published by the Free Software Foundation; either
14 // version 3 of the License, or (at your option) any later version.
15 //
16 // PJ is distributed in the hope that it will be useful, but WITHOUT ANY
17 // WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
18 // A PARTICULAR PURPOSE. See the GNU General Public License for more details.
19 //
20 // Linking this library statically or dynamically with other modules is making a
21 // combined work based on this library. Thus, the terms and conditions of the GNU
22 // General Public License cover the whole combination.
23 //
24 // As a special exception, the copyright holders of this library give you
25 // permission to link this library with independent modules to produce an
26 // executable, regardless of the license terms of these independent modules, and
27 // to copy and distribute the resulting executable under terms of your choice,
28 // provided that you also meet, for each linked independent module, the terms
29 // and conditions of the license of that module. An independent module is a module
30 // which is not derived from or based on this library. If you modify this library,
31 // you may extend this exception to your version of the library, but you are not
32 // obligated to do so. If you do not wish to do so, delete this exception
33 // statement from your version.
34 //
35 // A copy of the GNU General Public License is provided in the file gpl.txt. You
36 // may also obtain a copy of the GNU General Public License on the World Wide
37 // Web at http://www.gnu.org/licenses/gpl.html.
38 //
39 //******************************************************************************
40 package edu.rit.mp.buf;
41
42 import java.nio.ByteBuffer;
43 import java.nio.DoubleBuffer;
44
45 import edu.rit.mp.Buf;
46 import edu.rit.mp.DoubleBuf;
47 import edu.rit.pj.reduction.DoubleOp;
48 import edu.rit.pj.reduction.Op;
49 import edu.rit.util.Arrays;
50 import edu.rit.util.Range;
51
52 /**
53 * Class DoubleMatrixBuf provides a buffer for a matrix of double items sent or
54 * received using the Message Protocol (MP). The matrix row and column strides
55 * may be 1 or greater than 1. While an instance of class DoubleMatrixBuf may be
56 * constructed directly, normally you will use a factory method in class
57 * {@linkplain edu.rit.mp.DoubleBuf DoubleBuf}. See that class for further
58 * information.
59 *
60 * @author Alan Kaminsky
61 * @version 04-Apr-2009
62 */
63 public class DoubleMatrixBuf
64 extends DoubleBuf {
65
66 // Hidden data members.
67 double[][] myMatrix;
68 Range myRowRange;
69 Range myColRange;
70 int myLowerRow;
71 int myRowCount;
72 int myRowStride;
73 int myLowerCol;
74 int myColCount;
75 int myColStride;
76
77 // Exported constructors.
78 /**
79 * Construct a new double matrix buffer. It is assumed that the rows and
80 * columns of <code>theMatrix</code> are allocated and that each row of
81 * <code>theMatrix</code> has the same number of columns.
82 *
83 * @param theMatrix Matrix.
84 * @param theRowRange Range of rows to include.
85 * @param theColRange Range of columns to include.
86 */
87 public DoubleMatrixBuf(double[][] theMatrix,
88 Range theRowRange,
89 Range theColRange) {
90 super(theRowRange.length() * theColRange.length());
91 myMatrix = theMatrix;
92 myRowRange = theRowRange;
93 myColRange = theColRange;
94 myLowerRow = theRowRange.lb();
95 myRowCount = theRowRange.length();
96 myRowStride = theRowRange.stride();
97 myLowerCol = theColRange.lb();
98 myColCount = theColRange.length();
99 myColStride = theColRange.stride();
100 }
101
102 // Exported operations.
103 /**
104 * {@inheritDoc}
105 *
106 * Obtain the given item from this buffer.
107 * <P>
108 * The <code>get()</code> method must not block the calling thread; if it does,
109 * all message I/O in MP will be blocked.
110 */
111 public double get(int i) {
112 return myMatrix[i2r(i) * myRowStride + myLowerRow][i2c(i) * myColStride + myLowerCol];
113 }
114
115 /**
116 * {@inheritDoc}
117 *
118 * Store the given item in this buffer.
119 * <P>
120 * The <code>put()</code> method must not block the calling thread; if it does,
121 * all message I/O in MP will be blocked.
122 */
123 public void put(int i,
124 double item) {
125 myMatrix[i2r(i) * myRowStride + myLowerRow][i2c(i) * myColStride + myLowerCol] = item;
126 }
127
128 /**
129 * {@inheritDoc}
130 *
131 * Copy items from the given buffer to this buffer. The number of items
132 * copied is this buffer's length or <code>theSrc</code>'s length, whichever is
133 * smaller. If <code>theSrc</code> is this buffer, the <code>copy()</code> method
134 * does nothing.
135 * @exception ClassCastException (unchecked exception) Thrown if
136 * <code>theSrc</code>'s item data type is not the same as this buffer's item
137 * data type.
138 */
139 public void copy(Buf theSrc) {
140 if (theSrc == this) {
141 } else if (theSrc instanceof DoubleMatrixBuf) {
142 DoubleMatrixBuf src = (DoubleMatrixBuf) theSrc;
143 Arrays.copy(src.myMatrix, src.myRowRange, src.myColRange,
144 this.myMatrix, this.myRowRange, this.myColRange);
145 } else {
146 DoubleBuf.defaultCopy((DoubleBuf) theSrc, this);
147 }
148 }
149
150 /**
151 * {@inheritDoc}
152 *
153 * Create a buffer for performing parallel reduction using the given binary
154 * operation. The results of the reduction are placed into this buffer.
155 * @exception ClassCastException (unchecked exception) Thrown if this
156 * buffer's element data type and the given binary operation's argument data
157 * type are not the same.
158 */
159 public Buf getReductionBuf(Op op) {
160 return new DoubleMatrixReductionBuf(myMatrix, myRowRange, myColRange, (DoubleOp) op);
161 }
162
163 // Hidden operations.
164 /**
165 * {@inheritDoc}
166 *
167 * Send as many items as possible from this buffer to the given byte buffer.
168 * <P>
169 * The <code>sendItems()</code> method must not block the calling thread; if it
170 * does, all message I/O in MP will be blocked.
171 */
172 protected int sendItems(int i,
173 ByteBuffer buffer) {
174 DoubleBuffer doublebuffer = buffer.asDoubleBuffer();
175 int n = 0;
176 int r = i2r(i);
177 int row = r * myRowStride + myLowerRow;
178 int c = i2c(i);
179 int col = c * myColStride + myLowerCol;
180 int ncols = Math.min(myColCount - c, doublebuffer.remaining());
181 while (r < myRowCount && ncols > 0) {
182 double[] myMatrix_row = myMatrix[row];
183 while (c < ncols) {
184 doublebuffer.put(myMatrix_row[col]);
185 ++c;
186 col += myColStride;
187 }
188 n += ncols;
189 ++r;
190 row += myRowStride;
191 c = 0;
192 col = myLowerCol;
193 ncols = Math.min(myColCount, doublebuffer.remaining());
194 }
195 buffer.position(buffer.position() + 8 * n);
196 return n;
197 }
198
199 /**
200 * {@inheritDoc}
201 *
202 * Receive as many items as possible from the given byte buffer to this
203 * buffer.
204 * <P>
205 * The <code>receiveItems()</code> method must not block the calling thread; if
206 * it does, all message I/O in MP will be blocked.
207 */
208 protected int receiveItems(int i,
209 int num,
210 ByteBuffer buffer) {
211 DoubleBuffer doublebuffer = buffer.asDoubleBuffer();
212 num = Math.min(num, doublebuffer.remaining());
213 int n = 0;
214 int r = i2r(i);
215 int row = r * myRowStride + myLowerRow;
216 int c = i2c(i);
217 int col = c * myColStride + myLowerCol;
218 int ncols = Math.min(myColCount - c, num);
219 while (r < myRowCount && ncols > 0) {
220 double[] myMatrix_row = myMatrix[row];
221 for (c = 0; c < ncols; ++c) {
222 myMatrix_row[col] = doublebuffer.get();
223 col += myColStride;
224 }
225 num -= ncols;
226 n += ncols;
227 ++r;
228 row += myRowStride;
229 col = myLowerCol;
230 ncols = Math.min(myColCount, num);
231 }
232 buffer.position(buffer.position() + 8 * n);
233 return n;
234 }
235
236 /**
237 * Convert the given buffer index to a row index.
238 */
239 int i2r(int i) {
240 return myColCount == 0 ? i : i / myColCount;
241 }
242
243 /**
244 * Convert the given buffer index to a column index.
245 */
246 int i2c(int i) {
247 return myColCount == 0 ? 0 : i % myColCount;
248 }
249
250 }