Package ffx.algorithms.groovy

Class ClusteringTest

java.lang.Object
ffx.utilities.FFXTest
ffx.algorithms.misc.AlgorithmsTest
ffx.algorithms.groovy.ClusteringTest
public class ClusteringTest extends ffx.algorithms.misc.AlgorithmsTest
Tests the Cluster command to assess clustering based on distances. TODO: add more tests with more parameters
Author:
Aaron J. Nessler

  • Field Summary

    Fields inherited from class ffx.algorithms.misc.AlgorithmsTest

    algorithmsScript, binding

    Fields inherited from class ffx.utilities.FFXTest

    ffxCI, ffxOpenMM, logger

  • Constructor Summary

    Constructors
    Constructor
    Description
    ClusteringTest()
     

  • Method Summary

    Modifier and Type
    Method
    Description
    void
    testBaseCluster()
    Tests the Cluster script.
    void
    testClusterHelp()
     

    Methods inherited from class ffx.algorithms.misc.AlgorithmsTest

    afterTest, beforeClass, beforeTest, getResourceFile, getResourcePath

    Methods inherited from class ffx.utilities.FFXTest

    afterClass, registerTemporaryDirectory

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

  • Constructor Details

    • ClusteringTest

      public ClusteringTest()

  • Method Details

    • testBaseCluster

      public void testBaseCluster()
      Tests the Cluster script.

    • testClusterHelp

      public void testClusterHelp()