Uses of Class
ffx.potential.bonded.TorsionTorsion
Packages that use TorsionTorsion
Package
Description
The Bonded package implements bonded molecular mechanics terms such as bonds, angles, torsions,
etc.
The terms package contains analytical potential energy terms and their
gradients for bonded interactions (bond, angle, stretch-bend, torsions,
impropers, Urey-Bradley) and restraint terms used by Force Field X.
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Uses of TorsionTorsion in ffx.potential.bonded
Methods in ffx.potential.bonded that return TorsionTorsionModifier and TypeMethodDescriptionstatic TorsionTorsion
TorsionTorsion.torsionTorsionFactory
(Bond firstBond, Angle angle, Bond lastBond, ForceField forceField) torsionTorsionFactory.Methods in ffx.potential.bonded that return types with arguments of type TorsionTorsionModifier and TypeMethodDescriptionMSNode.getTorsionTorsionList()
Returns a List of all Torsion-Torsions below the present MSNode. -
Uses of TorsionTorsion in ffx.potential.terms
Methods in ffx.potential.terms that return TorsionTorsionModifier and TypeMethodDescriptionTorsionTorsionPotentialEnergy.getTorsionTorsion
(int index) Get the TorsionTorsion at a given index.TorsionTorsionPotentialEnergy.getTorsionTorsionArray()
Get an array of TorsionTorsions in this term.Methods in ffx.potential.terms that return types with arguments of type TorsionTorsionModifier and TypeMethodDescriptionTorsionTorsionPotentialEnergy.getTorsionTorsions()
Get an unmodifiable view of the TorsionTorsions in this term.Methods in ffx.potential.terms with parameters of type TorsionTorsionModifier and TypeMethodDescriptionboolean
TorsionTorsionPotentialEnergy.addTorsionTorsion
(TorsionTorsion torsionTorsion) Add a TorsionTorsion to this term.boolean
TorsionTorsionPotentialEnergy.addTorsionTorsions
(TorsionTorsion[] torsionTorsions) Add an array of TorsionTorsions to this term.boolean
TorsionTorsionPotentialEnergy.removeTorsionTorsion
(TorsionTorsion torsionTorsion) Remove a TorsionTorsion from this term.Method parameters in ffx.potential.terms with type arguments of type TorsionTorsionModifier and TypeMethodDescriptionboolean
TorsionTorsionPotentialEnergy.addTorsionTorsions
(List<TorsionTorsion> torsionTorsions) Add a list of TorsionTorsions to this term.Constructor parameters in ffx.potential.terms with type arguments of type TorsionTorsionModifierConstructorDescriptionTorsionTorsionPotentialEnergy
(String name, int forceGroup, List<TorsionTorsion> torsionTorsions) Create a TorsionTorsionPotentialEnergy initialized with a list of terms and force group.TorsionTorsionPotentialEnergy
(String name, Collection<TorsionTorsion> torsionTorsions) Create a TorsionTorsionPotentialEnergy initialized with a collection of terms.