Uses of Class
ffx.potential.bonded.Torsion
Packages that use Torsion
Package
Description
The Potential package implements molecular mechanics force fields with shared memory Parallel
Java and via OpenMM.
The Bonded package implements bonded molecular mechanics terms such as bonds, angles, torsions,
etc.
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Uses of Torsion in ffx.potential
Methods in ffx.potential that return TorsionModifier and TypeMethodDescriptionTorsion[]
ForceFieldEnergy.getTorsions()
Getter for the fieldtorsions
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Uses of Torsion in ffx.potential.bonded
Fields in ffx.potential.bonded declared as TorsionModifier and TypeFieldDescriptionfinal Torsion[]
TorsionTorsion.torsions
The two torsions that are coupled.Methods in ffx.potential.bonded that return TorsionModifier and TypeMethodDescriptionAtom.getTorsion
(Atom atom2, Atom atom3, Atom atom4) Finds a Torsion which contains this atom, and atoms 2, 3, and 4.Methods in ffx.potential.bonded that return types with arguments of type TorsionModifier and TypeMethodDescriptionPolymer.getPhiPsiList()
Get lists of the phi and psi torsions.MSNode.getTorsionList()
Returns a List of all Torsions below the present MSNode.Atom.getTorsions()
Getter for the fieldtorsions
.Methods in ffx.potential.bonded with parameters of type TorsionModifier and TypeMethodDescriptionvoid
Atom.setTorsion
(Torsion torsion) setTorsionstatic StretchTorsion
StretchTorsion.stretchTorsionFactory
(Torsion torsion, ForceField forceField) Attempt to create a new StretchTorsion based on the supplied torsion.