Uses of Class
ffx.potential.bonded.PiOrbitalTorsion

Packages that use PiOrbitalTorsion

Package	Description
ffx.potential.bonded	The Bonded package implements bonded molecular mechanics terms such as bonds, angles, torsions, etc.
ffx.potential.terms	The terms package contains analytical potential energy terms and their gradients for bonded interactions (bond, angle, stretch-bend, torsions, impropers, Urey-Bradley) and restraint terms used by Force Field X.

Uses of PiOrbitalTorsion in ffx.potential.bonded

Methods in ffx.potential.bonded that return PiOrbitalTorsion

Modifier and Type	Method	Description
static PiOrbitalTorsion	PiOrbitalTorsion.piOrbitalTorsionFactory(Bond bond, ForceField forceField)	Attempt to create a new PiOrbitalTorsion based on the supplied bond and forceField.

Methods in ffx.potential.bonded that return types with arguments of type PiOrbitalTorsion

Modifier and Type	Method	Description
List<PiOrbitalTorsion>	MSNode.getPiOrbitalTorsionList()	Returns a List of all Pi-Orbital Torsions below the present MSNode.

Uses of PiOrbitalTorsion in ffx.potential.terms

Methods in ffx.potential.terms that return PiOrbitalTorsion

Modifier and Type	Method	Description
PiOrbitalTorsion	PiOrbitalTorsionPotentialEnergy.getPiOrbitalTorsion(int index)	Get the PiOrbitalTorsion at a given index.
PiOrbitalTorsion[]	PiOrbitalTorsionPotentialEnergy.getPiOrbitalTorsionArray()	Get an array of PiOrbitalTorsions in this term.

Methods in ffx.potential.terms that return types with arguments of type PiOrbitalTorsion

Modifier and Type	Method	Description
List<PiOrbitalTorsion>	PiOrbitalTorsionPotentialEnergy.getPiOrbitalTorsions()	Get an unmodifiable view of the PiOrbitalTorsions in this term.

Methods in ffx.potential.terms with parameters of type PiOrbitalTorsion

Modifier and Type	Method	Description
boolean	PiOrbitalTorsionPotentialEnergy.addPiOrbitalTorsion(PiOrbitalTorsion piOrbitalTorsion)	Add a PiOrbitalTorsion to this term.
boolean	PiOrbitalTorsionPotentialEnergy.addPiOrbitalTorsions(PiOrbitalTorsion[] piOrbitalTorsions)	Add an array of PiOrbitalTorsions to this term.
boolean	PiOrbitalTorsionPotentialEnergy.removePiOrbitalTorsion(PiOrbitalTorsion piOrbitalTorsion)	Remove a PiOrbitalTorsion from this term.

Method parameters in ffx.potential.terms with type arguments of type PiOrbitalTorsion

Modifier and Type	Method	Description
boolean	PiOrbitalTorsionPotentialEnergy.addPiOrbitalTorsions(List<PiOrbitalTorsion> piOrbitalTorsions)	Add a list of PiOrbitalTorsions to this term.

Constructor parameters in ffx.potential.terms with type arguments of type PiOrbitalTorsion

Modifier	Constructor	Description
	PiOrbitalTorsionPotentialEnergy(String name, int forceGroup, List<PiOrbitalTorsion> piOrbitalTorsions)	Create a PiOrbitalTorsionPotentialEnergy initialized with a list of terms and force group.
	PiOrbitalTorsionPotentialEnergy(String name, Collection<PiOrbitalTorsion> piOrbitalTorsions)	Create a PiOrbitalTorsionPotentialEnergy initialized with a collection of terms.