Uses of Class
ffx.potential.bonded.AngleTorsion
Packages that use AngleTorsion
Package
Description
The Bonded package implements bonded molecular mechanics terms such as bonds, angles, torsions,
etc.
The terms package contains analytical potential energy terms and their
gradients for bonded interactions (bond, angle, stretch-bend, torsions,
impropers, Urey-Bradley) and restraint terms used by Force Field X.
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Uses of AngleTorsion in ffx.potential.bonded
Methods in ffx.potential.bonded that return types with arguments of type AngleTorsionModifier and TypeMethodDescriptionMSNode.getAngleTorsionList()
Returns a List of all AngleTorsions below the present MSNode. -
Uses of AngleTorsion in ffx.potential.terms
Methods in ffx.potential.terms that return AngleTorsionModifier and TypeMethodDescriptionAngleTorsionPotentialEnergy.getAngleTorsion
(int index) Get the AngleTorsion at a given index.AngleTorsionPotentialEnergy.getAngleTorsionArray()
Get an array of AngleTorsions in this term.Methods in ffx.potential.terms that return types with arguments of type AngleTorsionModifier and TypeMethodDescriptionAngleTorsionPotentialEnergy.getAngleTorsions()
Get an unmodifiable view of the AngleTorsions in this term.Methods in ffx.potential.terms with parameters of type AngleTorsionModifier and TypeMethodDescriptionboolean
AngleTorsionPotentialEnergy.addAngleTorsion
(AngleTorsion angleTorsion) Add an AngleTorsion to this term.boolean
AngleTorsionPotentialEnergy.addAngleTorsions
(AngleTorsion[] angleTorsions) Add an array of AngleTorsions to this term.boolean
AngleTorsionPotentialEnergy.removeAngleTorsion
(AngleTorsion angleTorsion) Remove an AngleTorsion from this term.Method parameters in ffx.potential.terms with type arguments of type AngleTorsionModifier and TypeMethodDescriptionboolean
AngleTorsionPotentialEnergy.addAngleTorsions
(List<AngleTorsion> angleTorsions) Add a list of AngleTorsions to this term.Constructor parameters in ffx.potential.terms with type arguments of type AngleTorsionModifierConstructorDescriptionAngleTorsionPotentialEnergy
(String name, int forceGroup, List<AngleTorsion> angleTorsions) Create an AngleTorsionPotentialEnergy initialized with a list of terms and force group.AngleTorsionPotentialEnergy
(String name, Collection<AngleTorsion> angleTorsions) Create an AngleTorsionPotentialEnergy initialized with a collection of terms.