Uses of Class
ffx.potential.bonded.Angle
Packages that use Angle
Package
Description
The Potential package implements molecular mechanics force fields with shared memory Parallel
Java and via OpenMM.
The Bonded package implements bonded molecular mechanics terms such as bonds, angles, torsions,
etc.
-
Uses of Angle in ffx.potential
Methods in ffx.potential that return AngleModifier and TypeMethodDescriptionAngle[]
ForceFieldEnergy.getAngles()
Getter for the fieldangles
.Angle[]
ForceFieldEnergy.getAngles
(AngleType.AngleMode angleMode) Getter for the fieldangles
with onlyAngleMode
angles. -
Uses of Angle in ffx.potential.bonded
Fields in ffx.potential.bonded declared as AngleModifier and TypeFieldDescriptionprotected final Angle
StretchBend.angle
Angle this Stretch-Bend is based on.protected final Angle
UreyBradley.angle
The Angle this UreyBradley term is based on.Methods in ffx.potential.bonded that return AngleMethods in ffx.potential.bonded that return types with arguments of type AngleModifier and TypeMethodDescriptionMSNode.getAngleList()
Returns a List of all Angles below the present MSNode.Atom.getAngles()
Getter for the fieldangles
.Methods in ffx.potential.bonded with parameters of type AngleModifier and TypeMethodDescriptionstatic OutOfPlaneBend
OutOfPlaneBend.outOfPlaneBendFactory
(Angle angle, ForceField forceField) Attempt to create a new OutOfPlaneBend instance for a given Angle and Force Field.void
setAnglestatic TorsionTorsion
TorsionTorsion.torsionTorsionFactory
(Bond firstBond, Angle angle, Bond lastBond, ForceField forceField) torsionTorsionFactory.static UreyBradley
UreyBradley.ureyBradlyFactory
(Angle angle, ForceField forceField) Attempt to create a new UreyBradley for the specified Angle.Constructors in ffx.potential.bonded with parameters of type AngleModifierConstructorDescriptionAngleTorsion
(Angle an1, Angle an2) AngleTorsion constructor.OutOfPlaneBend
(Angle angle, Atom atom) OutOfPlaneBend constructor.StretchBend
(Angle a) Constructor for the Stretch-Bend class.TorsionTorsion
(Bond firstBond, Angle angle, Bond lastBond, boolean reversed) Torsion-Torsion constructor.UreyBradley
(Angle a, UreyBradleyType ureyBradleyType) Constructor for the UreyBradley class. -
Uses of Angle in ffx.potential.constraint
Methods in ffx.potential.constraint with parameters of type AngleModifier and TypeMethodDescriptionstatic SettleConstraint
SettleConstraint.settleFactory
(Angle a012) Constructs a SETTLE constraint from an angle and its two bonds.