Uses of Class
ffx.openmm.VirtualSite
Packages that use VirtualSite
Package
Description
The OpenMM package includes Java classes that are analogues of the OpenMM C++ API.
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Uses of VirtualSite in ffx.openmm
Subclasses of VirtualSite in ffx.openmmModifier and TypeClassDescriptionclass
This is a VirtualSite that computes the particle location based on a local coordinate system.class
This is a VirtualSite that computes the particle location based on three other particles' locations.class
This is a VirtualSite that computes the particle location as a weighted average of three other particle's locations.class
This is a VirtualSite that computes the particle location as a weighted average of two other particle's locations.Methods in ffx.openmm that return VirtualSiteModifier and TypeMethodDescriptionSystem.getVirtualSite
(int index) Get the virtual site for a particle.Methods in ffx.openmm with parameters of type VirtualSiteModifier and TypeMethodDescriptionvoid
System.setVirtualSite
(int index, VirtualSite virtualSite) Set a particle to be a virtual site.