Package ffx.algorithms.thermodynamics

Class HistogramReader

java.lang.Object

java.io.Reader

java.io.BufferedReader

ffx.algorithms.thermodynamics.HistogramReader

All Implemented Interfaces:

Closeable, AutoCloseable, Readable

public class HistogramReader
extends BufferedReader

Read in the Histogram.

Since:

1.0

Author:

Michael J. Schnieders

Field Summary

Fields inherited from class java.io.Reader

lock

Constructor Summary

Constructors

Constructor	Description
HistogramReader(OrthogonalSpaceTempering.Histogram histogram, Reader reader)	Constructor.
HistogramReader(Reader reader)

Method Summary

Modifier and Type	Method	Description
int	getBiasCutoff()
double	getBiasMag()
int	getCountInterval()
double	getdUdLBinWidth()
int	getLambdaBins()
double	getTemperature()
double	getThetaFriction()
double	getThetaMass()
void	readHistogramFile()	Read the histogram file.

Methods inherited from class java.io.BufferedReader

close, lines, mark, markSupported, read, read, readLine, ready, reset, skip

Methods inherited from class java.io.Reader

nullReader, read, read, transferTo

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

HistogramReader

public HistogramReader(Reader reader)

HistogramReader

public HistogramReader(@Nullable
 OrthogonalSpaceTempering.Histogram histogram,
 Reader reader)

Constructor.

Parameters:

histogram - The Histogram instance.

reader - The Reader to use.

Method Details

getBiasCutoff

public int getBiasCutoff()

getBiasMag

public double getBiasMag()

getCountInterval

public int getCountInterval()

getdUdLBinWidth

public double getdUdLBinWidth()

getLambdaBins

public int getLambdaBins()

getTemperature

public double getTemperature()

getThetaFriction

public double getThetaFriction()

getThetaMass

public double getThetaMass()

readHistogramFile

public void readHistogramFile()

Read the histogram file.