ffx.algorithms.commands

Classes

• AnalyzeNEQ
• Anneal
• BAR
• Cluster
• Dynamics
• ForEachFile
• ForEachFile.ForEachFileLoop
• ForEachFile.ForEachFileRegion
• GenZ
• Histogram
• MBAR
• ManyBody
• Minimize
• MinimizeCrystals
• MinimizeOpenMM
• MutatePDB
• PhDynamics
• PhMinimize
• SaveRotamers
• Scheduler
• SortArc
• Superpose
• SuperposeCrystals
• Thermodynamics
• TorsionScan