Uses of Class
ffx.openmm.IntArray

Packages that use IntArray

Package	Description
ffx.openmm	The OpenMM package includes Java classes that are analogues of the OpenMM C++ API.
ffx.openmm.amoeba	The AMOEBA package includes Java classes that are analogues of the OpenMM C++ API for the AMOEBA model.

Uses of IntArray in ffx.openmm

Methods in ffx.openmm with parameters of type IntArray

Modifier and Type	Method	Description
int	CustomCentroidBondForce.addBond(IntArray groups, DoubleArray parameters)	Add a bond to the force
int	CustomCompoundBondForce.addBond(IntArray particles, DoubleArray parameters)	Add a bond to the force.
int	CustomCentroidBondForce.addGroup(IntArray particles, DoubleArray weights)	Add a particle group.
void	CustomCentroidBondForce.getBondParameters(int index, IntArray groups, DoubleArray parameters)	Get the properties of a bond.
void	CustomCompoundBondForce.getBondParameters(int index, IntArray particles, DoubleArray parameters)	Get the parameters for a bond.
void	CustomCentroidBondForce.getGroupParameters(int index, IntArray particles, DoubleArray weights)	Get the properties of a group.
void	CustomCentroidBondForce.setBondParameters(int index, IntArray groups, DoubleArray parameters)	Set the properties of a bond.
void	CustomCompoundBondForce.setBondParameters(int index, IntArray particles, DoubleArray parameters)	Set the parameters for a bond.
void	CustomCentroidBondForce.setGroupParameters(int index, IntArray particles, DoubleArray weights)	Set the properties of a group.

Uses of IntArray in ffx.openmm.amoeba

Methods in ffx.openmm.amoeba that return IntArray

Modifier and Type	Method	Description
IntArray	MultipoleForce.getCovalentMap(int i, int covalentType)	Get the covalent map for a given atom index and covalent type.
IntArray	MultipoleForce.getCovalentMaps(int i)	Get all covalent maps for a given atom index.
IntArray	VdwForce.getParticleExclusions(int i)	Get the particle exclusions.
IntArray	MultipoleForce.getPmeGridDimensions()	Get the PME grid dimensions.

Methods in ffx.openmm.amoeba with parameters of type IntArray

Modifier and Type	Method	Description
void	MultipoleForce.setCovalentMap(int i, int covalentType, IntArray covalentMap)	Set the covalent map.
void	VdwForce.setParticleExclusions(int i, IntArray exclusions)	Set the particle exclusions.
void	MultipoleForce.setPmeGridDimensions(IntArray gridDimensions)	Set the PME grid dimensions for the multipole force.