Uses of Class
ffx.openmm.DoubleArray

Packages that use DoubleArray

Package	Description
ffx.openmm
ffx.openmm.amoeba

Uses of DoubleArray in ffx.openmm

Methods in ffx.openmm with parameters of type DoubleArray

Modifier and Type	Method	Description
void	CustomAngleForce.addAngle(int i1, int i2, int i3, DoubleArray parameters)	Add an angle force to the OpenMM System.
void	CustomBondForce.addBond(int i1, int i2, DoubleArray parameters)	Add a bond to the OpenMM System.
int	CustomCentroidBondForce.addBond(IntArray groups, DoubleArray parameters)	Add a bond to the force
void	CustomCompoundBondForce.addBond(IntArray particles, DoubleArray parameters)	Add a Custom Compound Bond to the OpenMM System.
int	CustomCentroidBondForce.addGroup(IntArray particles, DoubleArray weights)	Add a particle group.
void	CustomExternalForce.addParticle(int index, DoubleArray particleParameters)	Add a particle to the force.
void	CustomGBForce.addParticle(DoubleArray particleParameters)	Add a particle to the force.
void	CustomNonbondedForce.addParticle(DoubleArray parameters)	Add a particle to the force.
void	CustomCentroidBondForce.getBondParameters(int index, IntArray groups, DoubleArray parameters)	Get the properties of a bond.
void	CustomCentroidBondForce.getGroupParameters(int index, IntArray particles, DoubleArray weights)	Get the properties of a group.
void	DoubleArray3D.set(int d1, int d2, DoubleArray value)	Set the value of the array at the given index.
void	CustomAngleForce.setAngleParameters(int index, int i1, int i2, int i3, DoubleArray parameters)	Set the parameters for one angle in the OpenMM System.
void	CustomBondForce.setBondParameters(int index, int i1, int i2, DoubleArray parameters)	Set the parameters for one bond in the OpenMM System.
void	CustomCentroidBondForce.setBondParameters(int index, IntArray groups, DoubleArray parameters)	Set the properties of a bond.
void	CustomCompoundBondForce.setBondParameters(int index, IntArray particles, DoubleArray parameters)	Set the parameters for a Custom Compound Bond.
void	CustomCentroidBondForce.setGroupParameters(int index, IntArray particles, DoubleArray weights)	Set the properties of a group.
void	CustomGBForce.setParticleParameters(int index, DoubleArray particleParameters)	Set the particle parameters.

Uses of DoubleArray in ffx.openmm.amoeba

Methods in ffx.openmm.amoeba with parameters of type DoubleArray

Modifier and Type	Method	Description
void	MultipoleForce.addMultipole(double charge, DoubleArray dipole, DoubleArray quadrupole, int axisType, int zaxis, int xaxis, int yaxis, double thole, double pdamp, double polarizability)	Add a multipole.
void	MultipoleForce.setExtrapolationCoefficients(DoubleArray exptCoefficients)	Set extrapolation coefficients.
void	MultipoleForce.setMultipoleParameters(int index, double charge, DoubleArray dipoles, DoubleArray quadrupoles, int axisType, int zaxis, int xaxis, int yaxis, double thole, double pdamp, double polarizability)	Set the multipole parameters.