Uses of Package
ffx.numerics.estimator

Packages that use ffx.numerics.estimator

Package	Description
ffx.numerics.estimator
ffx.potential.parsers	The Parsers package handles reading/writing files to/from the internal data structure.

Classes in ffx.numerics.estimator used by ffx.numerics.estimator

Class	Description
BennettAcceptanceRatio	The Bennett Acceptance Ratio class implements the Bennett Acceptance Ratio (BAR) statistical estimator, based on the Tinker implementation.
BootstrappableEstimator	The BootstrappableEstimator interface describes a StatisticalEstimator which can use bootstrap sampling as an additional method of calculating free energy and uncertainty.
MultistateBennettAcceptanceRatio	The MultistateBennettAcceptanceRatio class defines a statistical estimator based on a generalization to the Bennett Acceptance Ratio (BAR) method for multiple lambda windows.
MultistateBennettAcceptanceRatio.SeedType	Enum of MBAR seed types.
SequentialEstimator	The SequentialEstimator abstract class defines a statistical estimator based on perturbative potential energy differences between adjacent windows (e.g.
StatisticalEstimator	The StatisticalEstimator interface defines a free energy estimator in the most generic sense.
Zwanzig	The Zwanzig class implements exponential averaging/free energy perturbation using the Zwanzig relationship, in either the forwards or backwards direction (not both).
Zwanzig.Directionality	Directionality of the Zwanzig estimation (forwards perturbation or backwards perturbation).

Classes in ffx.numerics.estimator used by ffx.potential.parsers

Class	Description
MultistateBennettAcceptanceRatio	The MultistateBennettAcceptanceRatio class defines a statistical estimator based on a generalization to the Bennett Acceptance Ratio (BAR) method for multiple lambda windows.
MultistateBennettAcceptanceRatio.SeedType	Enum of MBAR seed types.